RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CALCRLQ16602 461 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 INF2Q27J81 1249 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 ANO6Q4KMQ2 910 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 HYIQ5T013 277 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 TTBK2Q6IQ55 1244 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 KRT26Q7Z3Y9 468 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 ZNF280CQ8ND82 737 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 SYMPKQ92797 1274 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 TRIM44Q96DX7 344 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 CALML4Q96GE6 196 aa7.73□□□□□ -1.17
ECHDC1-210ENST00000454859 PTPRFP10586 1907 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 PPP1R12BO60237 982 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 PPP1R11O60927 126 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 DTNBO60941 627 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 SETQ01105 290 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 IKQ13123 557 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 IQCB1Q15051 598 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 E2F4Q16254 413 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 CAMK4Q16566 473 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 LONRF3Q496Y0 759 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 DCPSQ96C86 337 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 KLRG1Q96E93 195 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 FEZ1Q99689 392 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 ANO3Q9BYT9 981 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 DISC1Q9NRI5 854 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 ADAMTS5Q9UNA0 930 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 POLR2AP24928 1970 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 VWA3AA6NCI4 1184 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 BECN2A8MW95 431 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 GCOM1H8Y6P7 765 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 CCNT1O60563 726 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 ZBED4O75132 1171 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 POLR2MP0CAP2 368 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 BCRP11274 1271 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 VEGFAP15692 232 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 MORC3Q14149 939 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 TBC1D10BQ4KMP7 808 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 SAMD7Q7Z3H4 446 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 SULF1Q8IWU6 871 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 CKAP2LQ8IYA6 745 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 MB21D1Q8N884 522 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 GTF3C2Q8WUA4 911 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 COA7Q96BR5 231 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 MRFAP1L1Q96HT8 127 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 CLIC6Q96NY7 704 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 CBX8Q9HC52 389 aa7.72□□□□□ -1.17
ECHDC1-210ENST00000454859 FRMPD4Q14CM0 1322 aa7.71□□□□□ -1.17
ECHDC1-210ENST00000454859 RLFQ13129 1914 aa7.71□□□□□ -1.17
ECHDC1-210ENST00000454859 FAM196BA6NMK8 535 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 MEIS2O14770 477 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 CBFA2T2O43439 604 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 STAM2O75886 525 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 IREB2P48200 963 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 HSD17B4P51659 736 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 JAG1P78504 1218 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 LETM2Q2VYF4 491 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 FAM83BQ5T0W9 1011 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 ANGEL2Q5VTE6 544 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 RRAGBQ5VZM2 374 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 PDXDC2PQ6P474 469 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 ERMNQ8TAM6 284 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 SLC38A10Q9HBR0 1119 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 KCNMB3Q9NPA1 279 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 KBTBD4Q9NVX7 518 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 HOXC10Q9NYD6 342 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 RNF181Q9P0P0 153 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 BIN2Q9UBW5 565 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 DDX25Q9UHL0 483 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 PPP1R9AQ9ULJ8 1098 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 A0A0G2JMZ2 1700 aa7.71□□□□□ -1.18
ECHDC1-210ENST00000454859 LOC102724159A0A0B4J2E5 919 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PVALEFA0A1B0GWK0 134 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 CXCL11O14625 94 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 MAFGO15525 162 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PTPRAP18433 802 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 SLC16A2P36021 539 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 STAT6P42226 847 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 FKBP1BP68106 108 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 MAP3K9P80192 1104 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 DPYDQ12882 1025 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PSMD2Q13200 908 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PWP2Q15269 919 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 JAKMIP3Q5VZ66 844 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 KRT79Q5XKE5 535 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 HAUS3Q68CZ6 603 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 LBX2Q6XYB7 198 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 ENOX1Q8TC92 643 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 NEK9Q8TD19 979 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 ACER1Q8TDN7 264 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PAGE5Q96GU1 130 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 C7orf25Q9BPX7 421 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 GGA3Q9NZ52 723 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 TMOD4Q9NZQ9 345 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 SERTAD1Q9UHV2 236 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 MTMR7Q9Y216 660 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms