RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 TRIT1Q9H3H1 467 aaKnown RBP5.24□□□□□ -1.57
HMGB1P15-201ENST00000453854 PAK6Q9NQU5 681 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P15-201ENST00000453854 BSDC1Q9NW68 430 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P15-201ENST00000453854 GPATCH2Q9NW75 528 aa5.24□□□□□ -1.57
HMGB1P15-201ENST00000453854 TNPO3Q9Y5L0 923 aaKnown RBP5.24□□□□□ -1.57
HMGB1P15-201ENST00000453854 BACE2Q9Y5Z0 518 aa5.24□□□□□ -1.57
HMGB1P15-201ENST00000453854 STXBP3O00186 592 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 MEIS1O00470 390 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 AQP7O14520 342 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 CD3EP07766 207 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 IFNGR1P15260 489 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 TXKP42681 527 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 CDKN1CP49918 316 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 NFKB2Q00653 900 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 PLEKHG6Q3KR16 790 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 RTP2Q5QGT7 225 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 EEF1DP3Q658K8 133 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 E4F1Q66K89 784 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 USP53Q70EK8 1073 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 THAP5Q7Z6K1 395 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 DDX42Q86XP3 938 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 CCDC103Q8IW40 242 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 AHI1Q8N157 1196 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 MTFR1LQ9H019 292 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 GPR27Q9NS67 375 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 PLAGL2Q9UPG8 496 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 TRAF6Q9Y4K3 522 aa5.23□□□□□ -1.57
HMGB1P15-201ENST00000453854 FAM155AB1AL88 458 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 CRTAMO95727 393 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 PDGFRBP09619 1106 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 KCNA6P17658 529 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 NAT1P18440 290 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 PMLP29590 882 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 CNGA1P29973 690 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 IGFALSP35858 605 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 CLCN7P51798 805 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 ZNF460Q14592 562 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 CNNM4Q6P4Q7 775 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 KCNT2Q6UVM3 1135 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 ZNF574Q6ZN55 896 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 ANKLE2Q86XL3 938 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 TP53INP2Q8IXH6 220 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 PPIL6Q8IXY8 311 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 UBR7Q8N806 425 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 MMP19Q99542 508 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 POLR3GLQ9BT43 218 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 GPRC5CQ9NQ84 441 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 SEMA3GQ9NS98 782 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 TMEFF2Q9UIK5 374 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 ZNF281Q9Y2X9 895 aa5.22□□□□□ -1.57
HMGB1P15-201ENST00000453854 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 WASH4PA8MWX3 477 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 B4E1Z4 1266 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 ARVCFO00192 962 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 FGF10O15520 208 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 OPA1O60313 960 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 RASGRP1O95267 797 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 CEACAM5P06731 702 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 PLS3P13797 630 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 ITGB5P18084 799 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 LTBRP36941 435 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 SEPHS1P49903 392 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 GPR85P60893 370 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 PCBP1Q15365 356 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 DHCR24Q15392 516 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 IQCEQ6IPM2 695 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 DDX46Q7L014 1031 aaKnown RBP5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 SPRED2Q7Z698 418 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 STRA8Q7Z7C7 330 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 KIF18BQ86Y91 864 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 FLCNQ8NFG4 579 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 BCL7CQ8WUZ0 217 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 PHF20Q9BVI0 1012 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 HOMER2Q9NSB8 354 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 KLHL42Q9P2K6 505 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 MCM8Q9UJA3 840 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 SNX11Q9Y5W9 270 aa5.21□□□□□ -1.58
HMGB1P15-201ENST00000453854 BTBD11A6QL63 1104 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 ALG1L2C9J202 215 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 WNT9AO14904 365 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 MEFVO15553 781 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 SYPP08247 313 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 TPP2P29144 1249 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 PCBP3P57721 371 aaKnown RBP5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 KCNAB2Q13303 367 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 SEPT7Q16181 437 aaKnown RBP5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 CT47A1Q5JQC4 288 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 CDKAL1Q5VV42 579 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 ZCCHC8Q6NZY4 707 aaKnown RBP5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 PKN3Q6P5Z2 889 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 ABHD17CQ6PCB6 329 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 LBX2Q6XYB7 198 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 RNF111Q6ZNA4 994 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 TMPRSS7Q7RTY8 843 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 IFNL3Q8IZI9 196 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 HSPA12BQ96MM6 686 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 TCFL5Q9UL49 500 aa5.2□□□□□ -1.58
HMGB1P15-201ENST00000453854 PCDHA9Q9Y5H5 950 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms