RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TRPV6Q9H1D0 765 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 IL23AQ9NPF7 189 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-210ENST00000453030 TRANK1O15050 2925 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 NCOR1O75376 2440 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 FGAP02671 866 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
GARNL3-210ENST00000453030 NOVP48745 357 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-210ENST00000453030 ALX1Q15699 326 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 PPM1EQ8WY54 764 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-210ENST00000453030 NOC4LQ9BVI4 516 aaKnown RBP13.76□□□□□ -0.21
GARNL3-210ENST00000453030 PRDM12Q9H4Q4 367 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 TET1Q8NFU7 2136 aa13.76□□□□□ -0.21
GARNL3-210ENST00000453030 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 MYH7BA7E2Y1 1941 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 FGRP09769 529 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 HSPD1P10809 573 aaKnown RBP13.75□□□□□ -0.21
GARNL3-210ENST00000453030 PDHBP11177 359 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 CALML3P27482 149 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 DUSP28Q4G0W2 176 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 MCMDC2Q4G0Z9 681 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 BTNL9Q6UXG8 535 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 MORC4Q8TE76 937 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 WDR11Q9BZH6 1224 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 WNT8AQ9H1J5 351 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 MTIF3Q9H2K0 278 aaKnown RBP13.75□□□□□ -0.21
GARNL3-210ENST00000453030 PRDM6Q9NQX0 595 aa13.75□□□□□ -0.21
GARNL3-210ENST00000453030 ADD3Q9UEY8 706 aaKnown RBP13.75□□□□□ -0.21
GARNL3-210ENST00000453030 XIRP2A4UGR9 3374 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 ZMYM6O95789 1325 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 TRIM6-TRIM34B2RNG4 842 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 FGBP02675 491 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 MYL3P08590 195 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 RAB30Q15771 203 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 TBC1D10CQ8IV04 446 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 PPP1R13LQ8WUF5 828 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 SCLYQ96I15 445 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 ALDH8A1Q9H2A2 487 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-210ENST00000453030 NKX2-4Q9H2Z4 354 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 TRMT13Q9NUP7 481 aaKnown RBP13.74□□□□□ -0.21
GARNL3-210ENST00000453030 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 Q9Y3F1 56 aa13.74□□□□□ -0.21
GARNL3-210ENST00000453030 NEDD4P46934 1319 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 TCF20Q9UGU0 1960 aaKnown RBP13.73□□□□□ -0.21
GARNL3-210ENST00000453030 ZBBXA8MT70 800 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 CYP2C9P11712 490 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 CPT1AP50416 773 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
GARNL3-210ENST00000453030 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
GARNL3-210ENST00000453030 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-210ENST00000453030 PPP2R5BQ15173 497 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 USH1GQ495M9 461 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
GARNL3-210ENST00000453030 YBX2Q9Y2T7 364 aaKnown RBP13.73□□□□□ -0.21
GARNL3-210ENST00000453030 TNKSO95271 1327 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 GOLGA8HP0CJ92 632 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 RABGGTBP53611 331 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 PDE4DQ08499 809 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 ADGRE1Q14246 886 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 MFSD6Q6ZSS7 791 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 SYMPKQ92797 1274 aaKnown RBP13.72□□□□□ -0.21
GARNL3-210ENST00000453030 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 CPVLQ9H3G5 476 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 TCP11L1Q9NUJ3 509 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
GARNL3-210ENST00000453030 PRRC2BQ5JSZ5 2229 aaKnown RBP13.72□□□□□ -0.21
GARNL3-210ENST00000453030 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-210ENST00000453030 WDR19Q8NEZ3 1342 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 RAD50Q92878 1312 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 IGFBP4P22692 258 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-210ENST00000453030 TJAP1Q5JTD0 557 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 COPS5Q92905 334 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
GARNL3-210ENST00000453030 SEZ6LQ9BYH1 1024 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-210ENST00000453030 SLC4A7Q9Y6M7 1214 aa13.71□□□□□ -0.21
GARNL3-210ENST00000453030 LOC102724159A0A0B4J2E5 919 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
GARNL3-210ENST00000453030 SNHG28P0DPA3 235 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 MYOGP15173 224 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 PWP2Q15269 919 aaKnown RBP13.7□□□□□ -0.22
GARNL3-210ENST00000453030 PPP2R2DQ66LE6 453 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms