RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
USP1-204ENST00000452143 PBX4Q9BYU1 374 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 TCP11L1Q9NUJ3 509 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 NT5C2P49902 561 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 SNAP25P60880 206 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
USP1-204ENST00000452143 RAB30Q15771 203 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 DUSP28Q4G0W2 176 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 ANKRD45Q5TZF3 282 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 SYDE2Q5VT97 1194 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 ZNF365Q70YC5 407 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 EEPD1Q7L9B9 569 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 HERVK_113Q902F9 699 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 SYMPKQ92797 1274 aaKnown RBP12.83□□□□□ -0.36
USP1-204ENST00000452143 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
USP1-204ENST00000452143 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 TOMM22Q9NS69 142 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.36
USP1-204ENST00000452143 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
USP1-204ENST00000452143 B4GALT4O60513 344 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 FGAP02671 866 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
USP1-204ENST00000452143 PDHBP11177 359 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 CYP2C18P33260 490 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 CPT1AP50416 773 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
USP1-204ENST00000452143 BAATQ14032 418 aaPredicted RBP12.82□□□□□ -0.36
USP1-204ENST00000452143 KIAA1211Q6ZU35 1233 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 GAS2L1Q99501 681 aaPredicted RBP12.82□□□□□ -0.36
USP1-204ENST00000452143 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
USP1-204ENST00000452143 PDGFCQ9NRA1 345 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 CCDC171Q6TFL3 1326 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 RAD50Q92878 1312 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 MYH6P13533 1939 aa12.82□□□□□ -0.36
USP1-204ENST00000452143 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 NFIBO00712 420 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 ACRP10323 421 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 SLC16A2P36021 539 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 RRP12Q5JTH9 1297 aaKnown RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 TTC14Q96N46 770 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 ALDH8A1Q9H2A2 487 aaPredicted RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 MSRAQ9UJ68 235 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 UMODL1Q5DID0 1318 aa12.81□□□□□ -0.36
USP1-204ENST00000452143 FRMPD2Q68DX3 1309 aaPredicted RBP12.81□□□□□ -0.36
USP1-204ENST00000452143 PTPDC1A2A3K4 754 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 NKRFO15226 690 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP1-204ENST00000452143 FGBP02675 491 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 PFKMP08237 780 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 SUPT20HL2P0C7V6 817 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 EDNRBP24530 442 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 PBX2P40425 430 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 PURAQ00577 322 aaKnown RBP12.8□□□□□ -0.36
USP1-204ENST00000452143 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 AAMPQ13685 434 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 BRDTQ58F21 947 aaPredicted RBP12.8□□□□□ -0.36
USP1-204ENST00000452143 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 GPATCH4Q5T3I0 446 aaKnown RBP12.8□□□□□ -0.36
USP1-204ENST00000452143 TTBK2Q6IQ55 1244 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
USP1-204ENST00000452143 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
USP1-204ENST00000452143 DNERQ8NFT8 737 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 PURBQ96QR8 312 aaKnown RBP12.8□□□□□ -0.36
USP1-204ENST00000452143 MAF1Q9H063 256 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 TRPV6Q9H1D0 765 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 WNT8AQ9H1J5 351 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
USP1-204ENST00000452143 GRXCR1A8MXD5 290 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 B4DLN1 442 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 PTGS1P23219 599 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 MRPL12P52815 198 aaKnown RBP12.79□□□□□ -0.36
USP1-204ENST00000452143 CCL23P55773 120 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 PSMC6P62333 389 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
USP1-204ENST00000452143 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
USP1-204ENST00000452143 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 USP38Q8NB14 1042 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 SCFD2Q8WU76 684 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 CLEC4DQ8WXI8 215 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 ESR2Q92731 530 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms