RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 MROH2AA6NES4 1674 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 QRICH2Q9H0J4 1663 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 ANKRD33BA6NCL7 494 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 GOLGA6L22H0YM25 854 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 NUAK1O60285 661 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 MED14OSP0DP75 135 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 ALDH1L2Q3SY69 923 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 TIGD5Q53EQ6 642 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 LRSAM1Q6UWE0 723 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 BNC2Q6ZN30 1099 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 SPPL2CQ8IUH8 684 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 TMEM57Q8N5G2 664 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 DTWD2Q8NBA8 298 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 MYRIPQ8NFW9 859 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 BAHD1Q8TBE0 780 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 GCC1Q96CN9 775 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 CWC22Q9HCG8 908 aaKnown RBP5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 EBF1Q9UH73 591 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 PCDHA11Q9Y5I1 949 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 DDX49Q9Y6V7 483 aaKnown RBP5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 ANKRD26Q9UPS8 1709 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 KIF24Q5T7B8 1368 aa5.03□□□□□ -1.6
HMGB3P22-202ENST00000451823 ZBTB7CA1YPR0 619 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 B8ZZF3 427 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 TNNI2P48788 182 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 HMGN5P82970 282 aaKnown RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 XPCQ01831 940 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 EXOSC9Q06265 439 aaKnown RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 CAMK2GQ13555 558 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 RABEP1Q15276 862 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 TAF7LQ5H9L4 462 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZNF605Q86T29 641 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 MORC1Q86VD1 984 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 SIRT2Q8IXJ6 389 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 GPT2Q8TD30 523 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 ARHGAP45Q92619 1136 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 DHX38Q92620 1227 aaKnown RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 ANP32BQ92688 251 aaKnown RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZNF428Q96B54 188 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 IL17RAQ96F46 866 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 BCL2L13Q9BXK5 485 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 GTPBP4Q9BZE4 634 aaKnown RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 MCOLN1Q9GZU1 580 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 RRP7AQ9Y3A4 280 aaKnown RBP5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 USP31Q70CQ4 1352 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 KIF1BO60333 1816 aa5.02□□□□□ -1.61
HMGB3P22-202ENST00000451823 PPLO60437 1756 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 KNDC1Q76NI1 1749 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 ASXL2Q76L83 1435 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 MYOCOSA0A1B0GUC4 107 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PATL2C9JE40 543 aaKnown RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PRRG2O14669 202 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PSPNO60542 156 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 CDC45O75419 566 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 KIF20AO95235 890 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PF4P02776 101 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 INHBBP09529 407 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 LTKP29376 864 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PDE6BP35913 854 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 TMPOP42166 694 aaKnown RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 MTHFSP49914 203 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 GALK1P51570 392 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 YARSP54577 528 aaKnown RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 LINC00310P59036 64 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 DLG4P78352 724 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PSMD2Q13200 908 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 TMEM201Q5SNT2 666 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 FTSJ3Q8IY81 847 aaKnown RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 LILRA2Q8N149 483 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PHC3Q8NDX5 983 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 CYB5D2Q8WUJ1 264 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 NOC4LQ9BVI4 516 aaKnown RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 SGPP1Q9BX95 441 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZNF552Q9H707 407 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 SPTLC3Q9NUV7 552 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 NOB1Q9ULX3 412 aaKnown RBP5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 EFCAB6Q5THR3 1501 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 TULP4Q9NRJ4 1543 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 PNPLA6Q8IY17 1366 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 ANKRD36BQ8N2N9 1353 aa5.01□□□□□ -1.61
HMGB3P22-202ENST00000451823 ABCC4O15439 1325 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 ADGRF5Q8IZF2 1346 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 SHISA3A0PJX4 238 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 FAM221AA4D161 298 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 FITM1A5D6W6 292 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 IPO8O15397 1037 aaKnown RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 GRIN3BO60391 1043 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 CILPO75339 1184 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 BPNT1O95861 308 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 F13A1P00488 732 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 GSPT1P15170 499 aaKnown RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 BMP7P18075 431 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 DAB2P98082 770 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 CLEC16AQ2KHT3 1053 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 CAVIN1Q6NZI2 390 aaKnown RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 CCDC84Q86UT8 332 aaPredicted RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 RELL1Q8IUW5 271 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 ITPRIPQ8IWB1 547 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 USHBP1Q8N6Y0 703 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 RNF141Q8WVD5 230 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms