RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TTC26A0AVF1 554 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 GCOM1H8Y6P7 765 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 STXBP3O00186 592 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 RNF8O76064 485 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 PAEPP09466 180 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 MYZAPP0CAP1 466 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 PRLRP16471 622 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 TMOD1P28289 359 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 CYLC1P35663 651 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 GUCY2FP51841 1108 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 COPB1P53618 953 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 GRIN1Q05586 938 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 SPAG1Q07617 926 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 TBC1D1Q86TI0 1168 aaPredicted RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 IFT81Q8WYA0 676 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 RAPGEF5Q92565 580 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 NUDT16Q96DE0 195 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 GDF3Q9NR23 364 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 DBNLQ9UJU6 430 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 LUC7L2Q9Y383 392 aaKnown RBP9.53□□□□□ -0.88
LSM5-208ENST00000450169 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 DUSP10Q9Y6W6 482 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 TOPAZ1Q8N9V7 1692 aa9.53□□□□□ -0.88
LSM5-208ENST00000450169 MST1RQ04912 1400 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 G3V3G9 751 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 IFIT3O14879 490 aaKnown RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 GLI1P08151 1106 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 FAM163BP0C2L3 166 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 TCP1P17987 556 aaKnown RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 CCND1P24385 295 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 PPARDQ03181 441 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 UBXN1Q04323 297 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 KIF5AQ12840 1032 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 TTF1Q15361 905 aaPredicted RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 CCDC38Q502W7 563 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 ANKRD20A2Q5SQ80 823 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 ANKRD20A1Q5TYW2 823 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 ANKRD20A3Q5VUR7 823 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 WDR59Q6PJI9 974 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 ANKRD23Q86SG2 305 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 TEX9Q8N6V9 391 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 ANKS4BQ8N8V4 417 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 GORASP1Q9BQQ3 440 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 SUDS3Q9H7L9 328 aaPredicted RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 SMARCAL1Q9NZC9 954 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 CTNND2Q9UQB3 1225 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 ESYT3A0FGR9 886 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 RASSF10A6NK89 507 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 PPP1R3GB7ZBB8 358 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 SH2B2O14492 632 aaPredicted RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 HSPD1P10809 573 aaKnown RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 PTPREP23469 700 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 PAFAH1B1P43034 410 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 CCDC197Q8NCU1 140 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 IL17REQ8NFR9 667 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 WHAMMQ8TF30 809 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 SUCLG2Q96I99 432 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 RBM41Q96IZ5 413 aaKnown RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 EPB41L5Q9HCM4 733 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 HELLSQ9NRZ9 838 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 RBM12Q9NTZ6 932 aaKnown RBP9.52□□□□□ -0.89
LSM5-208ENST00000450169 CEP131Q9UPN4 1083 aa9.52□□□□□ -0.89
LSM5-208ENST00000450169 LRRD1A4D1F6 860 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 DPPA5A6NC42 116 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 PRC1O43663 620 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 TACC1O75410 805 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 HEXIM1O94992 359 aaKnown RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 UPP2O95045 317 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 DRD4P21917 467 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 KIF5BP33176 963 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 PPP2R2AP63151 447 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 MXRA7P84157 204 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 GUCY2DQ02846 1103 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 USP4Q13107 963 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 BIRC3Q13489 604 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 TRIM29Q14134 588 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 IMMTQ16891 758 aaKnown RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 WASHC4Q2M389 1173 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 CWF19L2Q2TBE0 894 aaKnown RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 LRRC23Q53EV4 343 aaPredicted RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 ODF2Q5BJF6 829 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 TCP11X2Q5H9J9 407 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 NFRKBQ6P4R8 1299 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 LRIG3Q6UXM1 1119 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 RBM12BQ8IXT5 1001 aaKnown RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 KBTBD3Q8NAB2 608 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 KLHDC4Q8TBB5 520 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 PXYLP1Q8TE99 480 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 TBC1D5Q92609 795 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 KAZALD1Q96I82 304 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 PSMB7Q99436 277 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 HAUS7Q99871 368 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 KCNMB3Q9NPA1 279 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 EHD2Q9NZN4 543 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 SWAP70Q9UH65 585 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms