RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CHD7Q9P2D1 2997 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 MCM3APO60318 1980 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 PTH1RQ03431 593 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 RAB30Q15771 203 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 MAMDC4Q6UXC1 1216 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 OTOP2Q7RTS6 562 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 DGKHQ86XP1 1220 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 FAM126BQ8IXS8 530 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 NECAB3Q96P71 396 aaPredicted RBP20.56■□□□□ 0.88
FAM3A-216ENST00000449971 CNNM2Q9H8M5 875 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 ZSWIM5Q9P217 1185 aa20.56■□□□□ 0.88
FAM3A-216ENST00000449971 SGSM2O43147 1006 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 CST5P28325 142 aaPredicted RBP20.55■□□□□ 0.88
FAM3A-216ENST00000449971 RABGGTBP53611 331 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 CCL23P55773 120 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 RASIP1Q5U651 963 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 ARMCX2Q7L311 632 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 SKAP1Q86WV1 359 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 ZSCAN10Q96SZ4 725 aaPredicted RBP20.55■□□□□ 0.88
FAM3A-216ENST00000449971 SLC28A3Q9HAS3 691 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 IL23AQ9NPF7 189 aa20.55■□□□□ 0.88
FAM3A-216ENST00000449971 ZNF536O15090 1300 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 FGBP02675 491 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 PDHBP11177 359 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 ALAS1P13196 640 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 GJA9P57773 515 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 SYDE2Q5VT97 1194 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 CXCL17Q6UXB2 119 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 BTNL9Q6UXG8 535 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 CCDC144CPQ8IYA2 1237 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 MTIF3Q9H2K0 278 aaKnown RBP20.54■□□□□ 0.88
FAM3A-216ENST00000449971 ABHD16BQ9H3Z7 469 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 HIPK3Q9H422 1215 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 ACAD9Q9H845 621 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 KAT14Q9H8E8 782 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 RNF146Q9NTX7 359 aa20.54■□□□□ 0.88
FAM3A-216ENST00000449971 YBX2Q9Y2T7 364 aaKnown RBP20.54■□□□□ 0.88
FAM3A-216ENST00000449971 U3KPZ7 1027 aaPredicted RBP20.54■□□□□ 0.88
FAM3A-216ENST00000449971 UMODL1Q5DID0 1318 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.53■□□□□ 0.88
FAM3A-216ENST00000449971 PTGS1P23219 599 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 SKIV2LQ15477 1246 aaKnown RBP20.53■□□□□ 0.88
FAM3A-216ENST00000449971 TKFCQ3LXA3 575 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 ZNF467Q7Z7K2 595 aaPredicted RBP20.53■□□□□ 0.88
FAM3A-216ENST00000449971 HERVK_113Q902F9 699 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 FGD4Q96M96 766 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 TRERF1Q96PN7 1200 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 UPF3AQ9H1J1 476 aaKnown RBP20.53■□□□□ 0.88
FAM3A-216ENST00000449971 NCOR1O75376 2440 aa20.53■□□□□ 0.88
FAM3A-216ENST00000449971 TCF20Q9UGU0 1960 aaKnown RBP20.52■□□□□ 0.88
FAM3A-216ENST00000449971 ZBBXA8MT70 800 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 MYOGP15173 224 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 CNTN2Q02246 1040 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 ZNF543Q08ER8 600 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 TRDNQ13061 729 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.88
FAM3A-216ENST00000449971 PNMA1Q8ND90 353 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 CCPG1Q9ULG6 757 aa20.52■□□□□ 0.88
FAM3A-216ENST00000449971 XIRP2A4UGR9 3374 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 REV3LO60673 3130 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 CYP21A2P08686 494 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 GOLGA8HP0CJ92 632 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 TNFAIP2Q03169 654 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 PPP2R2DQ66LE6 453 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 KIAA1211Q6ZU35 1233 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
FAM3A-216ENST00000449971 ANKS1AQ92625 1134 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 FAM122AQ96E09 287 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 CCDC136Q96JN2 1154 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 TSPYL2Q9H2G4 693 aaPredicted RBP20.51■□□□□ 0.87
FAM3A-216ENST00000449971 RANBP17Q9H2T7 1088 aaKnown RBP20.51■□□□□ 0.87
FAM3A-216ENST00000449971 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
FAM3A-216ENST00000449971 TNKSO95271 1327 aa20.51■□□□□ 0.87
FAM3A-216ENST00000449971 CTAGE5O15320 804 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 CD4P01730 458 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 ICAM1P05362 532 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 SNHG28P0DPA3 235 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 TFF2Q03403 129 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 TRPV6Q9H1D0 765 aa20.5■□□□□ 0.87
FAM3A-216ENST00000449971 ITGA7Q13683 1181 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 MUM1L1Q5H9M0 696 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 GPATCH4Q5T3I0 446 aaKnown RBP20.49■□□□□ 0.87
FAM3A-216ENST00000449971 CYB5R4Q7L1T6 521 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 EEPD1Q7L9B9 569 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 TLK2Q86UE8 772 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 UBA5Q9GZZ9 404 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 AP5M1Q9H0R1 490 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 A1CFQ9NQ94 594 aaKnown RBP20.49■□□□□ 0.87
FAM3A-216ENST00000449971 ASTN1O14525 1302 aa20.49■□□□□ 0.87
FAM3A-216ENST00000449971 DYNC1LI2O43237 492 aaPredicted RBP20.48■□□□□ 0.87
FAM3A-216ENST00000449971 PLA2G5P39877 138 aa20.48■□□□□ 0.87
FAM3A-216ENST00000449971 PSMC6P62333 389 aa20.48■□□□□ 0.87
FAM3A-216ENST00000449971 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
FAM3A-216ENST00000449971 NSMFQ6X4W1 530 aa20.48■□□□□ 0.87
FAM3A-216ENST00000449971 SCLYQ96I15 445 aa20.48■□□□□ 0.87
FAM3A-216ENST00000449971 CERS4Q9HA82 394 aa20.48■□□□□ 0.87
FAM3A-216ENST00000449971 RBM8AQ9Y5S9 174 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms