RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TRIM43BA6NCK2 446 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 E7EWF7 191 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 DYNC1LI2O43237 492 aaPredicted RBP17.81■□□□□ 0.44
CHD3-205ENST00000449744 ZEB2O60315 1214 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 PDE4DQ08499 809 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 QRICH1Q2TAL8 776 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 CENPQQ7L2Z9 268 aaPredicted RBP17.81■□□□□ 0.44
CHD3-205ENST00000449744 FBXO11Q86XK2 927 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 DNERQ8NFT8 737 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 MAP4K1Q92918 833 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 TRIM43Q96BQ3 446 aaPredicted RBP17.81■□□□□ 0.44
CHD3-205ENST00000449744 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 TMEM39AQ9NV64 488 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 Q9Y3F1 56 aa17.81■□□□□ 0.44
CHD3-205ENST00000449744 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
CHD3-205ENST00000449744 A0A0U1RQG5 324 aaPredicted RBP17.8■□□□□ 0.44
CHD3-205ENST00000449744 RAG1P15918 1043 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 NKX3-2P78367 333 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 WTAPQ15007 396 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 FSCN1Q16658 493 aaKnown RBP17.8■□□□□ 0.44
CHD3-205ENST00000449744 ANKRD33Q7Z3H0 272 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 MCF2L2Q86YR7 1114 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 RGS22Q8NE09 1264 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 MAF1Q9H063 256 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 MRPL11Q9Y3B7 192 aaKnown RBP17.8■□□□□ 0.44
CHD3-205ENST00000449744 LRRC37A2A6NM11 1700 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 LCTP09848 1927 aa17.8■□□□□ 0.44
CHD3-205ENST00000449744 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 KLRF2D3W0D1 207 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 CTAGE5O15320 804 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 CABYRO75952 493 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 STAG2Q8N3U4 1231 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 SLC17A8Q8NDX2 589 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 WDR11Q9BZH6 1224 aa17.79■□□□□ 0.44
CHD3-205ENST00000449744 ARVCFO00192 962 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 TLR3O15455 904 aaKnown RBP17.78■□□□□ 0.44
CHD3-205ENST00000449744 FAAP100Q0VG06 881 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 DUSP28Q4G0W2 176 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 TMEM67Q5HYA8 995 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 CHST3Q7LGC8 479 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 AMNQ9BXJ7 453 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 TAF6LQ9Y6J9 622 aa17.78■□□□□ 0.44
CHD3-205ENST00000449744 PALM3A6NDB9 673 aaPredicted RBP17.77■□□□□ 0.44
CHD3-205ENST00000449744 PTGS1P23219 599 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 EDNRBP24530 442 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 CDK7P50613 346 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 GRM4Q14833 912 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 TMEM63BQ5T3F8 832 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 GPR153Q6NV75 609 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 CATIPQ7Z7H3 387 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 TBC1D5Q92609 795 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
CHD3-205ENST00000449744 SZT2Q5T011 3432 aa17.77■□□□□ 0.43
CHD3-205ENST00000449744 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
CHD3-205ENST00000449744 ZBTB5O15062 677 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 TRAF1Q13077 416 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 BMP2KLQ5H9B9 411 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 OR6J1Q8NGC5 347 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 SYTL5Q8TDW5 730 aaPredicted RBP17.76■□□□□ 0.43
CHD3-205ENST00000449744 NSUN6Q8TEA1 469 aaKnown RBP17.76■□□□□ 0.43
CHD3-205ENST00000449744 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
CHD3-205ENST00000449744 MYH6P13533 1939 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 NKRFO15226 690 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHD3-205ENST00000449744 CFBP00751 764 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 ITGB8P26012 769 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 CPT1AP50416 773 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 FPGSQ05932 587 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 SHHQ15465 462 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
CHD3-205ENST00000449744 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
CHD3-205ENST00000449744 TAAR1Q96RJ0 339 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 SEZ6LQ9BYH1 1024 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 LSG1Q9H089 658 aaKnown RBP17.75■□□□□ 0.43
CHD3-205ENST00000449744 SENP2Q9HC62 589 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 GPHNQ9NQX3 736 aaPredicted RBP17.75■□□□□ 0.43
CHD3-205ENST00000449744 POLR3EQ9NVU0 708 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 PCDHA1Q9Y5I3 950 aa17.75■□□□□ 0.43
CHD3-205ENST00000449744 TIMP1P01033 207 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 TXNP10599 105 aaKnown RBP17.74■□□□□ 0.43
CHD3-205ENST00000449744 ANTXR2P58335 489 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 TTLL4Q14679 1199 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 ARHGEF16Q5VV41 709 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 FAM126BQ8IXS8 530 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 DEFB123Q8N688 67 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 MTMR8Q96EF0 704 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 RMDN3Q96TC7 470 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
CHD3-205ENST00000449744 SLC27A2O14975 620 aa17.73■□□□□ 0.43
CHD3-205ENST00000449744 PRC1O43663 620 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms