RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PDIA3P30101 505 aaKnown RBP16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 CDC27P30260 824 aa16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 ADD1P35611 737 aaKnown RBP16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 ALDH8A1Q9H2A2 487 aaPredicted RBP16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 SOWAHBA6NEL2 793 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 B4DLN1 442 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 MRPL12P52815 198 aaKnown RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 AKAP17AQ02040 695 aaKnown RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 CPLX2Q6PUV4 134 aaKnown RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 MAMDC4Q6UXC1 1216 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 ARMCX2Q7L311 632 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 DEFB118Q96PH6 123 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 PAK6Q9NQU5 681 aaPredicted RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 FAM217BQ9NTX9 383 aaPredicted RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 V9GY48 417 aaPredicted RBP16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
GTF3C3-206ENST00000448539 NID2Q14112 1375 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 hCG_1642624A0A1W2PR95 340 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 GCOM1H8Y6P7 765 aaPredicted RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 CPLX1O14810 134 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 MSCO60682 206 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 SGPL1O95470 568 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 IGHA2P01877 340 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 TFRCP02786 760 aaKnown RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 POLR2MP0CAP2 368 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 CYBAP13498 195 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 GJA8P48165 433 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 RBM25P49756 843 aaKnown RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 AK2P54819 239 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 STK3Q13188 491 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 PRAMEF19Q5SWL8 479 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 DNERQ8NFT8 737 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 CUL5Q93034 780 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 FGD4Q96M96 766 aa16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
GTF3C3-206ENST00000448539 LOC102724159A0A0B4J2E5 919 aa16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 CAPN2P17655 700 aa16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 PWP2Q15269 919 aaKnown RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 PURBQ96QR8 312 aaKnown RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 ABHD16BQ9H3Z7 469 aa16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 DDX20Q9UHI6 824 aaKnown RBP16.17■□□□□ 0.18
GTF3C3-206ENST00000448539 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 hCG_1984214I3L0E3 225 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 SEPT4O43236 478 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 HSD17B4P51659 736 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 PDE4DQ08499 809 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 FUT2Q10981 343 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 TRIM22Q8IYM9 498 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 ZNF713Q8N859 430 aaPredicted RBP16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 SLC26A6Q9BXS9 759 aa16.16■□□□□ 0.18
GTF3C3-206ENST00000448539 MYH6P13533 1939 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 SMCHD1A6NHR9 2005 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 OPLAHO14841 1288 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 AKR1A1P14550 325 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 IFNAR1P17181 557 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 HOXA13P31271 388 aaPredicted RBP16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 SMARCC2Q8TAQ2 1214 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 BACH2Q9BYV9 841 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 PSTPIP2Q9H939 334 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 PLXNA1Q9UIW2 1896 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
GTF3C3-206ENST00000448539 CDKL5O76039 1030 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 RARBP10826 455 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 SCG2P13521 617 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 NAPAP54920 295 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 GHRHRQ02643 423 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 RABEP1Q15276 862 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 PFKFB3Q16875 520 aaPredicted RBP16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 WWC2Q6AWC2 1192 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 PPP1R18Q6NYC8 613 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms