RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 OSBPL9Q96SU4 736 aa17.57■□□□□ 0.4
CHRD-205ENST00000448472 BTG4Q9NY30 223 aa17.57■□□□□ 0.4
CHRD-205ENST00000448472 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
CHRD-205ENST00000448472 RAD21O60216 631 aa17.57■□□□□ 0.4
CHRD-205ENST00000448472 SF3A3Q12874 501 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■□□□□ 10.9
CHRD-205ENST00000448472 ARL6IP4Q66PJ3 421 aaKnown RBP17.57■□□□□ 0.4
CHRD-205ENST00000448472 EPB41L5Q9HCM4 733 aa17.57■□□□□ 0.4
CHRD-205ENST00000448472 USP17L3A6NCW0 530 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 USP17L4A6NCW7 530 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 FTCDO95954 541 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 AMPD3Q01432 767 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 GFPT1Q06210 699 aaPredicted RBP17.56■□□□□ 0.4
CHRD-205ENST00000448472 USP17L1Q7RTZ2 530 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 MTA3Q9BTC8 594 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 TBC1D7Q9P0N9 293 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 AGPSO00116 658 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
CHRD-205ENST00000448472 TTI2Q6NXR4 508 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 KANSL2Q9H9L4 492 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 PACSIN2Q9UNF0 486 aaPredicted RBP17.56■□□□□ 0.4
CHRD-205ENST00000448472 GOLGA6L10A6NI86 522 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 TNFRSF25Q93038 417 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 DHTKD1Q96HY7 919 aaPredicted RBP17.56■□□□□ 0.4
CHRD-205ENST00000448472 STIM2Q9P246 746 aa17.56■□□□□ 0.4
CHRD-205ENST00000448472 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHRD-205ENST00000448472 FECHP22830 423 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 NNTQ13423 1086 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 NAALADL2Q58DX5 795 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 CCDC155Q8N6L0 562 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 RIOK1Q9BRS2 568 aaKnown RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 SAP30BPQ9UHR5 308 aaKnown RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 MYO5AQ9Y4I1 1855 aaKnown RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 ZSCAN5CA6NGD5 496 aaPredicted RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 LRRC53A6NM62 1247 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 GOLGA8KD6RF30 607 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 TCP1P17987 556 aaKnown RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 PRDX5P30044 214 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 EPHB4P54760 987 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 NOX5Q96PH1 765 aa17.55■□□□□ 0.4
CHRD-205ENST00000448472 DUSP9Q99956 384 aaKnown RBP17.55■□□□□ 0.4
CHRD-205ENST00000448472 HEXIM1O94992 359 aaKnown RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 MSL3Q8N5Y2 521 aaKnown RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 KRT12Q99456 494 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 NDST4Q9H3R1 872 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 RBM12Q9NTZ6 932 aaKnown RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 GUCY1A3Q02108 690 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 MECOMQ03112 1051 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 CNNM4Q6P4Q7 775 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 RETREG2Q8NC44 543 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 DCP1AQ9NPI6 582 aaPredicted RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 PPANQ9NQ55 473 aaKnown RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 RHOBTB3O94955 611 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 EHHADHQ08426 723 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 CREG2Q8IUH2 290 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 PROCA1Q8NCQ7 364 aaPredicted RBP17.54■□□□□ 0.4
CHRD-205ENST00000448472 TAF4BQ92750 862 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 ARHGAP20Q9P2F6 1191 aa17.54■□□□□ 0.4
CHRD-205ENST00000448472 TRAF5O00463 557 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 ZNF263O14978 683 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 EPHB6O15197 1021 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
CHRD-205ENST00000448472 RAPGEF1Q13905 1077 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 CFAP221Q4G0U5 840 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 SV2BQ7L1I2 683 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 ZNF34Q8IZ26 560 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 SLC44A5Q8NCS7 719 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 TRIM9Q9C026 710 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 EIF3HO15372 352 aaKnown RBP eCLIP17.53■□□□□ 0.49e-8■■■□□ 16.6
CHRD-205ENST00000448472 OR52Z1P0C646 297 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 CARSP49589 748 aaKnown RBP17.53■□□□□ 0.4
CHRD-205ENST00000448472 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 IFT20Q8IY31 132 aa17.53■□□□□ 0.4
CHRD-205ENST00000448472 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 APBA1Q02410 837 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 NELFCDQ8IXH7 590 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 ZIM3Q96PE6 472 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.4
CHRD-205ENST00000448472 USP8P40818 1118 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 SH2D4AQ9H788 454 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 ANAPC4Q9UJX5 808 aa17.52■□□□□ 0.4
CHRD-205ENST00000448472 SMCO2A6NFE2 343 aa17.52■□□□□ 0.39
CHRD-205ENST00000448472 SLC1A4P43007 532 aa17.52■□□□□ 0.39
CHRD-205ENST00000448472 KCNB1Q14721 858 aa17.52■□□□□ 0.39
CHRD-205ENST00000448472 CEP85LQ5SZL2 805 aa17.52■□□□□ 0.39
CHRD-205ENST00000448472 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.39
CHRD-205ENST00000448472 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.39
CHRD-205ENST00000448472 E7EVH7 732 aa17.51■□□□□ 0.39
CHRD-205ENST00000448472 KLRC4O43908 158 aa17.51■□□□□ 0.39
CHRD-205ENST00000448472 VWA3BQ502W6 1294 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms