RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 LHX6Q9UPM6 363 aa8.72□□□□□ -1.01
AC004540.1-206ENST00000448056 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
AC004540.1-206ENST00000448056 PCDHA1Q9Y5I3 950 aa8.72□□□□□ -1.01
AC004540.1-206ENST00000448056 RLFQ13129 1914 aa8.72□□□□□ -1.01
AC004540.1-206ENST00000448056 PTPDC1A2A3K4 754 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 JAK2O60674 1132 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 SCG2P13521 617 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 ERCC3P19447 782 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 SP3Q02447 781 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 TRAF1Q13077 416 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 TKFCQ3LXA3 575 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 USH1GQ495M9 461 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 SHCBP1Q8NEM2 672 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 CHST13Q8NET6 341 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 SMARCC2Q8TAQ2 1214 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 CLEC4DQ8WXI8 215 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 COA7Q96BR5 231 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 DDX11Q96FC9 970 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 PORCNQ9H237 461 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 MROH8Q9H579 483 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 ORC3Q9UBD5 711 aaPredicted RBP8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 TSKSQ9UJT2 592 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 THSD7BQ9C0I4 1608 aa8.71□□□□□ -1.02
AC004540.1-206ENST00000448056 DEXIO95424 95 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 ALAS1P13196 640 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 MAPK4P31152 587 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 COPB2P35606 906 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 HMGN5P82970 282 aaKnown RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 LACTBP83111 547 aaPredicted RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 MUM1L1Q5H9M0 696 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 HEATR3Q7Z4Q2 680 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 CCAR1Q8IX12 1150 aaKnown RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 RGS22Q8NE09 1264 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 WASF1Q92558 559 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 INTS4Q96HW7 963 aaKnown RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 EFCC1Q9HA90 598 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 BARHL2Q9NY43 387 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 MRPL11Q9Y3B7 192 aaKnown RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 ABCB11O95342 1321 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 STK36Q9NRP7 1315 aa8.7□□□□□ -1.02
AC004540.1-206ENST00000448056 hCG_1984214I3L0E3 225 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 STXBP3O00186 592 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 OPLAHO14841 1288 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 STRNO43815 780 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 FKTNO75072 461 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 CTGFP29279 349 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 PSMC4P43686 418 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 BECN1Q14457 450 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 KIF22Q14807 665 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 WDR78Q5VTH9 848 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 GPR142Q7Z601 462 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 PLEKHH3Q7Z736 793 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 ZNF713Q8N859 430 aaPredicted RBP8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 ZNF296Q8WUU4 475 aaPredicted RBP8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 TBC1D5Q92609 795 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 AIFM3Q96NN9 605 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 ALG1Q9BT22 464 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 ARHGAP39Q9C0H5 1083 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 MAF1Q9H063 256 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 ACAD9Q9H845 621 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 PSTPIP2Q9H939 334 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 SH3GLB2Q9NR46 395 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 RNF146Q9NTX7 359 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 FBXO40Q9UH90 709 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 SMC3Q9UQE7 1217 aa8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 BAZ2BQ9UIF8 2168 aaKnown RBP8.69□□□□□ -1.02
AC004540.1-206ENST00000448056 SMCO2A6NFE2 343 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 SLC15A5A6NIM6 579 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 NFIBO00712 420 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 FOXN1O15353 648 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 HSPA1AP0DMV8 641 aaKnown RBP8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 HSPA1BP0DMV9 641 aaKnown RBP8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 FCER1AP12319 257 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 PTPREP23469 700 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 GJB2P29033 226 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 NAPAP54920 295 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 FCGRTP55899 365 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 CAP1Q01518 475 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 IFFO2Q5TF58 517 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 MCF2L2Q86YR7 1114 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 ABRAQ8N0Z2 381 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 FAM177A1Q8N128 213 aaPredicted RBP8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 ANKRD35Q8N283 1001 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 SAMD3Q8N6K7 520 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 FAM184AQ8NB25 1140 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 SHISA4Q96DD7 197 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 ERO1AQ96HE7 468 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms