RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PPM1JQ5JR12 505 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 PRSS36Q5K4E3 855 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 HP1BP3Q5SSJ5 553 aaPredicted RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 GPR158Q5T848 1215 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 ZNF468Q5VIY5 522 aaPredicted RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 KRBA2Q6ZNG9 492 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 TOGARAM2Q6ZUX3 1019 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 USP53Q70EK8 1073 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 MTDHQ86UE4 582 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 HID1Q8IV36 788 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 MRPL41Q8IXM3 137 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 BAHD1Q8TBE0 780 aaPredicted RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 GJA10Q969M2 543 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 HSPBAP1Q96EW2 488 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 RCC1LQ96I51 464 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 TNIP3Q96KP6 325 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 AIFM3Q96NN9 605 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 DPH2Q9BQC3 489 aaPredicted RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 ZHX3Q9H4I2 956 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 PLCB1Q9NQ66 1216 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 ANLNQ9NQW6 1124 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 FRRS1LQ9P0K9 344 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 DDX20Q9UHI6 824 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 SAP30BPQ9UHR5 308 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 PHTF1Q9UMS5 762 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 PCDHA9Q9Y5H5 950 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 FANCGO15287 622 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 PMM2O15305 246 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 IL33O95760 270 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 CFBP00751 764 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 ASGR2P07307 311 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 VCAM1P19320 739 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 MAN1A1P33908 653 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 ADH7P40394 386 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 HALP42357 657 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 ZNF280AP59817 542 aaPredicted RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 ERVK-24P63145 666 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 RBM10P98175 930 aaKnown RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 OCRLQ01968 901 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 GUCY1A3Q02108 690 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 DSG1Q02413 1049 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 RING1Q06587 406 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 ADCY1Q08828 1119 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 CHAF1AQ13111 956 aaPredicted RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 SF1Q15637 639 aaKnown RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 INAVAQ3KP66 663 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 ALFQ53S48 1182 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 GTF2IRD2BQ6EKJ0 949 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 CCDC70Q6NSX1 233 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 PGM2L1Q6PCE3 622 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 C1orf228Q6PIY5 440 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 TXNDC11Q6PKC3 985 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 C8orf86Q6ZUL3 223 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 GTF2IRD2Q86UP8 949 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 C7orf61Q8IZ16 206 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 TMEM145Q8NBT3 493 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 C1orf162Q8NEQ5 155 aaPredicted RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 BRF1Q92994 677 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 TNFRSF25Q93038 417 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 WNT8BQ93098 351 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 RUNDC1Q96C34 613 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 SCLT1Q96NL6 688 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 HERPUD2Q9BSE4 406 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 USP26Q9BXU7 913 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 GP6Q9HCN6 339 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 CABP5Q9NP86 173 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 EMC7Q9NPA0 242 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 THG1LQ9NWX6 298 aaKnown RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 LUZP4Q9P127 313 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 CGGBP1Q9UFW8 167 aaPredicted RBP4.77□□□□□ -1.65
PMS1-216ENST00000447734 MRFAP1Q9Y605 127 aa4.77□□□□□ -1.65
PMS1-216ENST00000447734 A0A0U1RQG5 324 aaPredicted RBP4.76□□□□□ -1.65
PMS1-216ENST00000447734 LINC01387J3KSC0 135 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 FZD9O00144 591 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 CPP00450 1065 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 HSPA6P17066 643 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 HOXC12P31275 282 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 GRIK1P39086 918 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ECI1P42126 302 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 GJA9P57773 515 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 STK3Q13188 491 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ZBTB37Q5TC79 503 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 STYK1Q6J9G0 422 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 PSAPL1Q6NUJ1 521 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ABHD17CQ6PCB6 329 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ASXL2Q76L83 1435 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ZNF354CQ86Y25 554 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 CMTR2Q8IYT2 770 aaKnown RBP4.76□□□□□ -1.65
PMS1-216ENST00000447734 ARHGEF39Q8N4T4 335 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 IL22RA1Q8N6P7 574 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ZNF507Q8TCN5 953 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 PARD3BQ8TEW8 1205 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 DCAF4Q8WV16 495 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 FAXDC2Q96IV6 333 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 NUP88Q99567 741 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms