RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 KIAA1551Q9HCM1 1747 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 RPS6KA5O75582 802 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 IVLP07476 585 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 VAV2P52735 878 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 DIXDC1Q155Q3 683 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 SECISBP2LQ93073 1101 aaKnown RBP18.25■□□□□ 0.51
PBX3-207ENST00000447726 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 DRC1Q96MC2 740 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 TSPYL1Q9H0U9 437 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 SLC39A2Q9NP94 309 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 CAPN6Q9Y6Q1 641 aa18.25■□□□□ 0.51
PBX3-207ENST00000447726 PALM3A6NDB9 673 aaPredicted RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 KLRF2D3W0D1 207 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 MCM3P25205 808 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 GGCXP38435 758 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 MRPS25P82663 173 aaKnown RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 GALNT17Q6IS24 598 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 ZSCAN29Q8IWY8 852 aaPredicted RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 ERGIC2Q96RQ1 377 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 C7orf25Q9BPX7 421 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 MMTAG2Q9BU76 263 aaKnown RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 SELENOOQ9BVL4 669 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 ANO9A1A5B4 782 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 NAPAP54920 295 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 GRIK5Q16478 980 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 CCDC96Q2M329 555 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 ZNF444Q8N0Y2 327 aaPredicted RBP18.24■□□□□ 0.51
PBX3-207ENST00000447726 CUEDC2Q9H467 287 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 MLXIPQ9HAP2 919 aa18.24■□□□□ 0.51
PBX3-207ENST00000447726 ERCC3P19447 782 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 FAM114A1Q8IWE2 563 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 AFAP1L1Q8TED9 768 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 TGFBRAP1Q8WUH2 860 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 HDAC7Q8WUI4 952 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 AK8Q96MA6 479 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 RASSF4Q9H2L5 321 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 FAM207AQ9NSI2 230 aaPredicted RBP18.23■□□□□ 0.51
PBX3-207ENST00000447726 ARHGAP20Q9P2F6 1191 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 SAP30BPQ9UHR5 308 aaKnown RBP18.23■□□□□ 0.51
PBX3-207ENST00000447726 LAMB1P07942 1786 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 RREB1Q92766 1687 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 COL14A1Q05707 1796 aaKnown RBP18.23■□□□□ 0.51
PBX3-207ENST00000447726 AGPSO00116 658 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 CREG2Q8IUH2 290 aa18.23■□□□□ 0.51
PBX3-207ENST00000447726 CCDC47Q96A33 483 aaKnown RBP18.23■□□□□ 0.51
PBX3-207ENST00000447726 SMCO2A6NFE2 343 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 SEMA3FQ13275 785 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 SPA17Q15506 151 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 FKBP15Q5T1M5 1219 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 NLRP3Q96P20 1036 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 RSPH14Q9UHP6 348 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 NONOQ15233 471 aaKnown RBP eCLIP18.22■□□□□ 0.51
PBX3-207ENST00000447726 FIGNQ5HY92 759 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 PSMB7Q99436 277 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
PBX3-207ENST00000447726 MAGEF1Q9HAY2 307 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 VAT1LQ9HCJ6 419 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 SNX12Q9UMY4 172 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 PLAGL2Q9UPG8 496 aa18.22■□□□□ 0.51
PBX3-207ENST00000447726 A0A1W2PQJ5 194 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 ANKRD65E5RJM6 399 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 MOCS3O95396 460 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 CDK17Q00537 523 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 USP17L2Q6R6M4 530 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 GOLGA6L1Q8N7Z2 621 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 SMARCAL1Q9NZC9 954 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 PCDHA13Q9Y5I0 950 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 SPATA31A1Q5TZJ5 1347 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 RASA1P20936 1047 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 MAPKAPK5Q8IW41 473 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 CRACR2AQ9BSW2 395 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 LRRC1Q9BTT6 524 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
PBX3-207ENST00000447726 DMGDHQ9UI17 866 aaKnown RBP18.21■□□□□ 0.51
PBX3-207ENST00000447726 SIK3Q9Y2K2 1263 aa18.21■□□□□ 0.51
PBX3-207ENST00000447726 LDHBP07195 334 aaKnown RBP18.2■□□□□ 0.5
PBX3-207ENST00000447726 CXCR5P32302 372 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 ATP2B2Q01814 1243 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 SKIDA1Q1XH10 827 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 CENPPQ6IPU0 288 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 KRT25Q7Z3Z0 450 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 NEK8Q86SG6 692 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 TBCKQ8TEA7 893 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 SH2D4AQ9H788 454 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 JRKLQ9Y4A0 524 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 EIF4A3P38919 411 aaKnown RBP18.2■□□□□ 0.5
PBX3-207ENST00000447726 TXKP42681 527 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 KIF11P52732 1056 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 CNNM4Q6P4Q7 775 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
PBX3-207ENST00000447726 DYMQ7RTS9 669 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms