RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CCDC82Q8N4S0 544 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 DNERQ8NFT8 737 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 FGD4Q96M96 766 aa25.4■■□□□ 1.66
APOE-204ENST00000446996 CNTN2Q02246 1040 aa25.39■■□□□ 1.66
APOE-204ENST00000446996 TRIM32Q13049 653 aa25.39■■□□□ 1.66
APOE-204ENST00000446996 TBC1D32Q96NH3 1257 aa25.39■■□□□ 1.66
APOE-204ENST00000446996 PAK6Q9NQU5 681 aaPredicted RBP25.39■■□□□ 1.66
APOE-204ENST00000446996 KIAA0100Q14667 2235 aaKnown RBP25.39■■□□□ 1.65
APOE-204ENST00000446996 SOWAHBA6NEL2 793 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 OPLAHO14841 1288 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 PRPF3O43395 683 aaKnown RBP25.38■■□□□ 1.65
APOE-204ENST00000446996 GJB1P08034 283 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 CYP2C19P33261 490 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 HSD17B4P51659 736 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 RABEP1Q15276 862 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 CPLX2Q6PUV4 134 aaKnown RBP25.38■■□□□ 1.65
APOE-204ENST00000446996 MORC4Q8TE76 937 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 RNF26Q9BY78 433 aaPredicted RBP25.38■■□□□ 1.65
APOE-204ENST00000446996 RNF208Q9H0X6 261 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 UNC93B1Q9H1C4 597 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 TPCN1Q9ULQ1 816 aa25.38■■□□□ 1.65
APOE-204ENST00000446996 V9GY48 417 aaPredicted RBP25.38■■□□□ 1.65
APOE-204ENST00000446996 B4DLN1 442 aa25.37■■□□□ 1.65
APOE-204ENST00000446996 PFKFB2O60825 505 aa25.37■■□□□ 1.65
APOE-204ENST00000446996 CYBAP13498 195 aa25.37■■□□□ 1.65
APOE-204ENST00000446996 MRPL12P52815 198 aaKnown RBP25.37■■□□□ 1.65
APOE-204ENST00000446996 CCT2P78371 535 aaKnown RBP25.37■■□□□ 1.65
APOE-204ENST00000446996 PIBF1Q8WXW3 757 aa25.37■■□□□ 1.65
APOE-204ENST00000446996 MPHOSPH6Q99547 160 aaKnown RBP25.37■■□□□ 1.65
APOE-204ENST00000446996 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.37■■□□□ 1.655e-7■■■■■ 39.7
APOE-204ENST00000446996 SLKQ9H2G2 1235 aaPredicted RBP25.37■■□□□ 1.65
APOE-204ENST00000446996 CALML3P27482 149 aa25.36■■□□□ 1.65
APOE-204ENST00000446996 SLC30A10Q6XR72 485 aa25.36■■□□□ 1.65
APOE-204ENST00000446996 SYTL5Q8TDW5 730 aaPredicted RBP25.36■■□□□ 1.65
APOE-204ENST00000446996 TBC1D5Q92609 795 aa25.36■■□□□ 1.65
APOE-204ENST00000446996 MCM3APO60318 1980 aa25.36■■□□□ 1.65
APOE-204ENST00000446996 MSCO60682 206 aa25.35■■□□□ 1.65
APOE-204ENST00000446996 SNAI1O95863 264 aaPredicted RBP25.35■■□□□ 1.65
APOE-204ENST00000446996 CFBP00751 764 aa25.35■■□□□ 1.65
APOE-204ENST00000446996 ALDH5A1P51649 535 aaPredicted RBP25.35■■□□□ 1.65
APOE-204ENST00000446996 PPP1R18Q6NYC8 613 aa25.35■■□□□ 1.65
APOE-204ENST00000446996 LARP6Q9BRS8 491 aaKnown RBP25.35■■□□□ 1.65
APOE-204ENST00000446996 ABHD16BQ9H3Z7 469 aa25.35■■□□□ 1.65
APOE-204ENST00000446996 CNPY2Q9Y2B0 182 aa25.35■■□□□ 1.65
APOE-204ENST00000446996 GCOM1H8Y6P7 765 aaPredicted RBP25.34■■□□□ 1.65
APOE-204ENST00000446996 PIK3CDO00329 1044 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 CPLX1O14810 134 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 POLR2MP0CAP2 368 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 GJA8P48165 433 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 RGS19P49795 217 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 AKAP17AQ02040 695 aaKnown RBP25.34■■□□□ 1.65
APOE-204ENST00000446996 PFKFB3Q16875 520 aaPredicted RBP25.34■■□□□ 1.65
APOE-204ENST00000446996 ARMCX2Q7L311 632 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 NCOA5Q9HCD5 579 aaKnown RBP25.34■■□□□ 1.65
APOE-204ENST00000446996 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.34■■□□□ 1.65
APOE-204ENST00000446996 ASTN1O14525 1302 aa25.34■■□□□ 1.65
APOE-204ENST00000446996 CDKL5O76039 1030 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 SGPL1O95470 568 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 SCRN1Q12765 414 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 TRIM22Q8IYM9 498 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 TRPV1Q8NER1 839 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 NSUN6Q8TEA1 469 aaKnown RBP25.33■■□□□ 1.65
APOE-204ENST00000446996 IWS1Q96ST2 819 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 GLT8D2Q9H1C3 349 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 BARHL2Q9NY43 387 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 LIMCH1Q9UPQ0 1083 aa25.33■■□□□ 1.65
APOE-204ENST00000446996 hCG_1642624A0A1W2PR95 340 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 SEPT4O43236 478 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 ZNF865P0CJ78 1059 aaPredicted RBP25.32■■□□□ 1.64
APOE-204ENST00000446996 SCG2P13521 617 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 EDNRBP24530 442 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 CCND3P30281 292 aaPredicted RBP25.32■■□□□ 1.64
APOE-204ENST00000446996 STK3Q13188 491 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 WWC2Q6AWC2 1192 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 HEATR3Q7Z4Q2 680 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 CUL5Q93034 780 aa25.32■■□□□ 1.64
APOE-204ENST00000446996 ZSCAN31Q96LW9 406 aaPredicted RBP25.32■■□□□ 1.64
APOE-204ENST00000446996 MYCP01106 439 aaPredicted RBP25.31■■□□□ 1.64
APOE-204ENST00000446996 SSRP1Q08945 709 aaKnown RBP25.31■■□□□ 1.64
APOE-204ENST00000446996 ACVR2BQ13705 512 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 PKN1Q16512 942 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 ME3Q16798 604 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 FAM177A1Q8N128 213 aaPredicted RBP25.31■■□□□ 1.64
APOE-204ENST00000446996 PURBQ96QR8 312 aaKnown RBP25.31■■□□□ 1.64
APOE-204ENST00000446996 TAAR1Q96RJ0 339 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 CRISPLD2Q9H0B8 497 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 PSTPIP2Q9H939 334 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 COL20A1Q9P218 1284 aa25.31■■□□□ 1.64
APOE-204ENST00000446996 TNRC18O15417 2968 aaPredicted RBP25.3■■□□□ 1.64
APOE-204ENST00000446996 ST18O60284 1047 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 U2AF1L4Q8WU68 220 aaKnown RBP25.3■■□□□ 1.64
APOE-204ENST00000446996 CCDC12Q8WUD4 166 aaPredicted RBP25.3■■□□□ 1.64
APOE-204ENST00000446996 PHKBQ93100 1093 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 GTF3C6Q969F1 213 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 DEFB118Q96PH6 123 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 RMDN3Q96TC7 470 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 SLC26A6Q9BXS9 759 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 KATNBL1Q9H079 304 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 VTA1Q9NP79 307 aa25.3■■□□□ 1.64
APOE-204ENST00000446996 DDX20Q9UHI6 824 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms