RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
HDAC4-204ENST00000446876 PCDHA1Q9Y5I3 950 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 PNMA6FA0A0J9YX94 578 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 PGK1P00558 417 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 RARBP10826 455 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 CAPN2P17655 700 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 PTGS1P23219 599 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 RPS6KB1P23443 525 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 FGD1P98174 961 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 SYTL5Q8TDW5 730 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-204ENST00000446876 XPNPEP3Q9NQH7 507 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 FAM184BQ9ULE4 1060 aa17.2■□□□□ 0.34
HDAC4-204ENST00000446876 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-204ENST00000446876 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-204ENST00000446876 ZBTB43O43298 467 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
HDAC4-204ENST00000446876 CFBP00751 764 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 COL6A1P12109 1028 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 IRX5P78411 483 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-204ENST00000446876 LRRC41Q15345 812 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 SYNE3Q6ZMZ3 975 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 TMTC3Q6ZXV5 915 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 RGS22Q8NE09 1264 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 DPF3Q92784 378 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 BRF1Q92994 677 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
HDAC4-204ENST00000446876 TAAR1Q96RJ0 339 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 PDGFCQ9NRA1 345 aa17.19■□□□□ 0.34
HDAC4-204ENST00000446876 ADD3Q9UEY8 706 aaKnown RBP17.19■□□□□ 0.34
HDAC4-204ENST00000446876 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 DNM1LO00429 736 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 PSMA5P28066 241 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 HOXA13P31271 388 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-204ENST00000446876 ADCYAP1R1P41586 468 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 GNAQP50148 359 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 RTN1Q16799 776 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 TMEM63BQ5T3F8 832 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 MCF2L2Q86YR7 1114 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 MORC4Q8TE76 937 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 CNTNAP5Q8WYK1 1306 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 SYNRGQ9UMZ2 1314 aa17.18■□□□□ 0.34
HDAC4-204ENST00000446876 MYADML2A6NDP7 307 aa17.17■□□□□ 0.34
HDAC4-204ENST00000446876 KBTBD13C9JR72 458 aa17.17■□□□□ 0.34
HDAC4-204ENST00000446876 ADAMTS4O75173 837 aa17.17■□□□□ 0.34
HDAC4-204ENST00000446876 SEC24BO95487 1268 aa17.17■□□□□ 0.34
HDAC4-204ENST00000446876 TAPT1Q6NXT6 567 aa17.17■□□□□ 0.34
HDAC4-204ENST00000446876 ARRDC4Q8NCT1 418 aa17.17■□□□□ 0.34
HDAC4-204ENST00000446876 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
HDAC4-204ENST00000446876 SENP6Q9GZR1 1112 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-204ENST00000446876 FAM217BQ9NTX9 383 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-204ENST00000446876 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
HDAC4-204ENST00000446876 KIAA1217Q5T5P2 1943 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 EDNRBP24530 442 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 CDC27P30260 824 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 HSD17B4P51659 736 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 PDE4DQ08499 809 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 RUFY3Q7L099 469 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 DNERQ8NFT8 737 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 FERMT2Q96AC1 680 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 VTA1Q9NP79 307 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 PCDH10Q9P2E7 1040 aa17.16■□□□□ 0.34
HDAC4-204ENST00000446876 DUSP11O75319 330 aaKnown RBP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 SMPD1P17405 629 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 ATN1P54259 1190 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 GHRHRQ02643 423 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 TNFAIP2Q03169 654 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 FUT2Q10981 343 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 LARP6Q9BRS8 491 aaKnown RBP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 AGXT2Q9BYV1 514 aa17.15■□□□□ 0.34
HDAC4-204ENST00000446876 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
HDAC4-204ENST00000446876 LOC102724159A0A0B4J2E5 919 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 H0YGN5 161 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 EVI5O60447 810 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-204ENST00000446876 TOB2Q14106 344 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-204ENST00000446876 PWP2Q15269 919 aaKnown RBP17.14■□□□□ 0.33
HDAC4-204ENST00000446876 PRPF38BQ5VTL8 546 aaKnown RBP17.14■□□□□ 0.33
HDAC4-204ENST00000446876 RNF180Q86T96 592 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 FCHSD1Q86WN1 690 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 C7orf61Q8IZ16 206 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 CYP46A1Q9Y6A2 500 aa17.14■□□□□ 0.33
HDAC4-204ENST00000446876 GCOM1H8Y6P7 765 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-204ENST00000446876 POLR2MP0CAP2 368 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms