RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 LOC102724159A0A0B4J2E5 919 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 PRPF3O43395 683 aaKnown RBP16.24■□□□□ 0.19
SSBP3-208ENST00000444533 SCG2P13521 617 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
SSBP3-208ENST00000444533 PWP2Q15269 919 aaKnown RBP16.24■□□□□ 0.19
SSBP3-208ENST00000444533 PPP1R18Q6NYC8 613 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 TRIB2Q92519 343 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 WASF1Q92558 559 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 FAM217BQ9NTX9 383 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-208ENST00000444533 DOCK3Q8IZD9 2030 aa16.24■□□□□ 0.19
SSBP3-208ENST00000444533 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-208ENST00000444533 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
SSBP3-208ENST00000444533 TAL1P17542 331 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-208ENST00000444533 CNGA1P29973 690 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 SCRN1Q12765 414 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 CCL14Q16627 93 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-208ENST00000444533 SLC35G1Q2M3R5 365 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
SSBP3-208ENST00000444533 PHKBQ93100 1093 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 ZNF333Q96JL9 665 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 KIF2CQ99661 725 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 EHMT1Q9H9B1 1298 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
SSBP3-208ENST00000444533 BAZ2BQ9UIF8 2168 aaKnown RBP16.23■□□□□ 0.19
SSBP3-208ENST00000444533 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 SYNGAP1Q96PV0 1343 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 CCDC85CA6NKD9 419 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 DEXIO95424 95 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 MYCP01106 439 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-208ENST00000444533 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 FUT2Q10981 343 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 ME3Q16798 604 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 ARHGEF16Q5VV41 709 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 GTF3C6Q969F1 213 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 BARHL2Q9NY43 387 aa16.22■□□□□ 0.19
SSBP3-208ENST00000444533 MSCO60682 206 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 CCL5P13501 91 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 GNA11P29992 359 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 CYP2C19P33261 490 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 HSD17B4P51659 736 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 ADCY7P51828 1080 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 PDE4DQ08499 809 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 WWC2Q6AWC2 1192 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.191e-8■■□□□ 12.3
SSBP3-208ENST00000444533 RMDN3Q96TC7 470 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 C6orf50Q9HD87 102 aa16.21■□□□□ 0.19
SSBP3-208ENST00000444533 ZNFX1Q9P2E3 1918 aaKnown RBP16.2■□□□□ 0.18
SSBP3-208ENST00000444533 SPDYE3A6NKU9 549 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 CAPN2P17655 700 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 ALDH5A1P51649 535 aaPredicted RBP16.2■□□□□ 0.18
SSBP3-208ENST00000444533 CACNB2Q08289 660 aaPredicted RBP16.2■□□□□ 0.18
SSBP3-208ENST00000444533 NTRK3Q16288 839 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 FCHSD1Q86WN1 690 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
SSBP3-208ENST00000444533 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
SSBP3-208ENST00000444533 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
SSBP3-208ENST00000444533 SMCO2A6NFE2 343 aa16.19■□□□□ 0.18
SSBP3-208ENST00000444533 STXBP3O00186 592 aa16.19■□□□□ 0.18
SSBP3-208ENST00000444533 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 TRIM29Q14134 588 aa16.19■□□□□ 0.18
SSBP3-208ENST00000444533 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 ORC3Q9UBD5 711 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 ZHX1Q9UKY1 873 aaPredicted RBP16.19■□□□□ 0.18
SSBP3-208ENST00000444533 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 PIK3CDO00329 1044 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 PPFIA3O75145 1194 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-208ENST00000444533 NLRP5P59047 1200 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 GHRHRQ02643 423 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 STXBP2Q15833 593 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 MAP3K21Q5TCX8 1036 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 CCDC83Q8IWF9 413 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 UNC93B1Q9H1C4 597 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 RIC8AQ9NPQ8 531 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms