RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 CCDC196A0A1B0GTZ2 297 aa20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 SEPT4O43236 478 aa20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 CCDC82Q8N4S0 544 aa20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 MPHOSPH6Q99547 160 aaKnown RBP20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 CRISPLD2Q9H0B8 497 aa20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 DDX20Q9UHI6 824 aaKnown RBP20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 ZHX1Q9UKY1 873 aaPredicted RBP20.2■□□□□ 0.82
SMARCAL1-209ENST00000444508 SNAI1O95863 264 aaPredicted RBP20.19■□□□□ 0.82
SMARCAL1-209ENST00000444508 MLLT1Q03111 559 aaPredicted RBP20.19■□□□□ 0.82
SMARCAL1-209ENST00000444508 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
SMARCAL1-209ENST00000444508 LCTP09848 1927 aa20.19■□□□□ 0.82
SMARCAL1-209ENST00000444508 MCM3APO60318 1980 aa20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 LOC102724159A0A0B4J2E5 919 aa20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 CFBP00751 764 aa20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 PWP2Q15269 919 aaKnown RBP20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 LHX8Q68G74 356 aa20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 PURBQ96QR8 312 aaKnown RBP20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 OGDHLQ9ULD0 1010 aa20.18■□□□□ 0.82
SMARCAL1-209ENST00000444508 B4DLN1 442 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 FARP2O94887 1054 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 AKR1A1P14550 325 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 ALDH5A1P51649 535 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 MRPL12P52815 198 aaKnown RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 ACVR2BQ13705 512 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 TOB2Q14106 344 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 ANKLE1Q8NAG6 615 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 DNERQ8NFT8 737 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 TBC1D5Q92609 795 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 MAP3K20Q9NYL2 800 aaKnown RBP20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 ASTN1O14525 1302 aa20.17■□□□□ 0.82
SMARCAL1-209ENST00000444508 CDC27P30260 824 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 EVCP57679 992 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 SAMD3Q8N6K7 520 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 FAM184BQ9ULE4 1060 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 CNTNAP5Q8WYK1 1306 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 NID2Q14112 1375 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 FRMPD3Q5JV73 1810 aa20.16■□□□□ 0.82
SMARCAL1-209ENST00000444508 hCG_1642624A0A1W2PR95 340 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 GCOM1H8Y6P7 765 aaPredicted RBP20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 OPLAHO14841 1288 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 POLR2MP0CAP2 368 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 RARBP10826 455 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 PDIA3P30101 505 aaKnown RBP20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 ADD1P35611 737 aaKnown RBP20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 HSD17B4P51659 736 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 ANO1Q5XXA6 986 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 IL17RAQ96F46 866 aa20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 FAM217BQ9NTX9 383 aaPredicted RBP20.15■□□□□ 0.82
SMARCAL1-209ENST00000444508 GHRHRQ02643 423 aa20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 PDE4DQ08499 809 aa20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 ANKRD1Q15327 319 aa20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 NSUN6Q8TEA1 469 aaKnown RBP20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 RMDN3Q96TC7 470 aa20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 ALDH8A1Q9H2A2 487 aaPredicted RBP20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 UPF2Q9HAU5 1272 aaKnown RBP20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
SMARCAL1-209ENST00000444508 HOXA13P31271 388 aaPredicted RBP20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 FUT2Q10981 343 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 CCDC144BQ3MJ40 725 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 ARHGEF16Q5VV41 709 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 EEPD1Q7L9B9 569 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 HEATR3Q7Z4Q2 680 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 CUL5Q93034 780 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 TAAR1Q96RJ0 339 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 KATNBL1Q9H079 304 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 XPNPEP3Q9NQH7 507 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 COL20A1Q9P218 1284 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 LRRC37A2A6NM11 1700 aa20.13■□□□□ 0.81
SMARCAL1-209ENST00000444508 CCT2P78371 535 aaKnown RBP20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 NECAB2Q7Z6G3 386 aa20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 FBXO16Q8IX29 292 aaPredicted RBP20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 ARRDC4Q8NCT1 418 aa20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 GPKOWQ92917 476 aaPredicted RBP eCLIP20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 LARP6Q9BRS8 491 aaKnown RBP20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
SMARCAL1-209ENST00000444508 hCG_1984214I3L0E3 225 aa20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 EIF2AK2P19525 551 aaKnown RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 EDNRBP24530 442 aa20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 NEK4P51957 841 aa20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 AKAP17AQ02040 695 aaKnown RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 UBE2Q1Q7Z7E8 422 aa20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 ZNF713Q8N859 430 aaPredicted RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 DIS3LQ8TF46 1054 aaKnown RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 PAWRQ96IZ0 340 aaKnown RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 IWS1Q96ST2 819 aa20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 C22orf23Q9BZE7 217 aa20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 NCOA5Q9HCD5 579 aaKnown RBP20.11■□□□□ 0.81
SMARCAL1-209ENST00000444508 CPLX1O14810 134 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 DUSP11O75319 330 aaKnown RBP20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 AK2P54819 239 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms