RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 TTC22Q5TAA0 569 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 TTYH1Q9H313 450 aaPredicted RBP12.79□□□□□ -0.36
SHC1-208ENST00000444179 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 WDR19Q8NEZ3 1342 aa12.79□□□□□ -0.36
SHC1-208ENST00000444179 SPTBN5Q9NRC6 3674 aaKnown RBP12.78□□□□□ -0.36
SHC1-208ENST00000444179 VCANP13611 3396 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 PTPDC1A2A3K4 754 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 EDNRBP24530 442 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 PSMC6P62333 389 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 USH1GQ495M9 461 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 GPATCH4Q5T3I0 446 aaKnown RBP12.78□□□□□ -0.36
SHC1-208ENST00000444179 MFSD5Q6N075 450 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 ADGRF4Q8IZF3 695 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 SLC17A8Q8NDX2 589 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 TRPV6Q9H1D0 765 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 SEMA6BQ9H3T3 888 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 ADD3Q9UEY8 706 aaKnown RBP12.78□□□□□ -0.36
SHC1-208ENST00000444179 Q9Y3F1 56 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 PRUNE2Q8WUY3 3088 aa12.78□□□□□ -0.36
SHC1-208ENST00000444179 CSF2RAP15509 400 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 CYP2C18P33260 490 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 SMAD3P84022 425 aaKnown RBP12.77□□□□□ -0.37
SHC1-208ENST00000444179 PTH1RQ03431 593 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 ITGA7Q13683 1181 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 SEC23AQ15436 765 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
SHC1-208ENST00000444179 SLC35G1Q2M3R5 365 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 DUSP28Q4G0W2 176 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 VWCEQ96DN2 955 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 RNPC3Q96LT9 517 aaKnown RBP12.77□□□□□ -0.37
SHC1-208ENST00000444179 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.379e-10■■□□□ 13
SHC1-208ENST00000444179 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 PPP1R12CQ9BZL4 782 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 COL20A1Q9P218 1284 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 TNKSO95271 1327 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 UMODL1Q5DID0 1318 aa12.77□□□□□ -0.37
SHC1-208ENST00000444179 ACRP10323 421 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 CHMLP26374 656 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
SHC1-208ENST00000444179 QRICH1Q2TAL8 776 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 TMEM240Q5SV17 173 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 RASIP1Q5U651 963 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 COPS5Q92905 334 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
SHC1-208ENST00000444179 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
SHC1-208ENST00000444179 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 OPLAHO14841 1288 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 B4GALT4O60513 344 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 PPP1R11O60927 126 aaPredicted RBP12.75□□□□□ -0.37
SHC1-208ENST00000444179 CABYRO75952 493 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 ARIH2O95376 493 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 CYP21A2P08686 494 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 NT5C2P49902 561 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
SHC1-208ENST00000444179 LAMA4Q16363 1823 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 CCDC178Q5BJE1 867 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 SYTL5Q8TDW5 730 aaPredicted RBP12.75□□□□□ -0.37
SHC1-208ENST00000444179 TAAR1Q96RJ0 339 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 KRT23Q9C075 422 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
SHC1-208ENST00000444179 GRXCR1A8MXD5 290 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
SHC1-208ENST00000444179 PDE4DQ08499 809 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 ASPRV1Q53RT3 343 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 ZNF365Q70YC5 407 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
SHC1-208ENST00000444179 WNT8AQ9H1J5 351 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 CNNM2Q9H8M5 875 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 PNMA2Q9UL42 364 aa12.74□□□□□ -0.37
SHC1-208ENST00000444179 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
SHC1-208ENST00000444179 ABCB11O95342 1321 aa12.73□□□□□ -0.37
SHC1-208ENST00000444179 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
SHC1-208ENST00000444179 A6NJR5 290 aa12.73□□□□□ -0.37
SHC1-208ENST00000444179 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
SHC1-208ENST00000444179 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
SHC1-208ENST00000444179 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
SHC1-208ENST00000444179 PBX2P40425 430 aa12.73□□□□□ -0.37
SHC1-208ENST00000444179 COL9A3Q14050 684 aaPredicted RBP12.73□□□□□ -0.37
SHC1-208ENST00000444179 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms