RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LGR5O75473 907 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TMCC1O94876 653 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 FSBPO95073 299 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 MBD4O95243 580 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TROVE2P10155 538 aaKnown RBP eCLIP3.08□□□□□ -1.92
LIG4-203ENST00000442234 IARSP41252 1262 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 IRAK1P51617 712 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PICALMQ13492 652 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TRIM29Q14134 588 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TAF11Q15544 211 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TAF1CQ15572 869 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 AKAP4Q5JQC9 854 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 VPS53Q5VIR6 699 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CDCA2Q69YH5 1023 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 GRAMD4Q6IC98 578 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PRR5LQ6MZQ0 368 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 MIS18BP1Q6P0N0 1132 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CCDC13Q8IYE1 715 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PAF1Q8N7H5 531 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CD99L2Q8TCZ2 262 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 ELP3Q9H9T3 547 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 ZFATQ9P243 1243 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PCDHGC5Q9Y5F6 944 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DUOX2Q9NRD8 1548 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 EPG5Q9HCE0 2579 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 A6NNZ2 444 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 B4DLN1 442 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 NDUFB5O43674 189 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 STX6O43752 255 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 DIAPH2O60879 1101 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 DNAJC8O75937 253 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 LDHAP00338 332 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 FAM200BP0CF97 657 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ZSCAN22P10073 491 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 MYCLP1P12525 358 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 PHKG2P15735 406 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SYT1P21579 422 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 USP5P45974 858 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 RARSP54136 660 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 GTF2IP78347 998 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 DNM1Q05193 864 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 CBX3Q13185 183 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 G3BP1Q13283 466 aaKnown RBP eCLIP3.07□□□□□ -1.92
LIG4-203ENST00000442234 HLFQ16534 295 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TUBB8Q3ZCM7 444 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CCDC152Q4G0S7 254 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SLC44A4Q53GD3 710 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 RASIP1Q5U651 963 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CCDC73Q6ZRK6 1079 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 LCA5Q86VQ0 697 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 PLA2G4DQ86XP0 818 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 MYOCDQ8IZQ8 938 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ARHGAP18Q8N392 663 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CAGE1Q8TC20 777 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 USP33Q8TEY7 942 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SNRNP27Q8WVK2 155 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 BHMTQ93088 406 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 OPTNQ96CV9 577 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 IL17RAQ96F46 866 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 BRD8Q9H0E9 1235 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TMEM134Q9H6X4 195 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CERS4Q9HA82 394 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SUGCTQ9HAC7 445 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 HAUS2Q9NVX0 235 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ABCF2Q9UG63 623 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 MTUS1Q9ULD2 1270 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 FAM184BQ9ULE4 1060 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 MAPK8IP1Q9UQF2 711 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ZNF711Q9Y462 761 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 WDR87Q6ZQQ6 2873 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 P4HA2O15460 535 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TAF5LO75529 589 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SERPINC1P01008 464 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SP100P23497 879 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 CDC25BP30305 580 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 MATR3P43243 847 aaKnown RBP eCLIP3.07□□□□□ -1.92
LIG4-203ENST00000442234 ATP1A2P50993 1020 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ARPC4P59998 168 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 PLS1Q14651 629 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 KARSQ15046 597 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 ZFYVE27Q5T4F4 411 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 KLHL10Q6JEL2 608 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 FERMT3Q86UX7 667 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 LDHDQ86WU2 507 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SLF2Q8IX21 1173 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 MAB21L3Q8N8X9 362 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 RASSF8Q8NHQ8 419 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 USP6NLQ92738 828 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 STAMBPL1Q96FJ0 436 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 POM121Q96HA1 1249 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SPATA32Q96LK8 384 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 GBP5Q96PP8 586 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SH3GL1Q99961 368 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 UBXN6Q9BZV1 441 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 SIL1Q9H173 461 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 VCPKMTQ9H867 229 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 LUC7LQ9NQ29 371 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 TFIP11Q9UBB9 837 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 TSR3Q9UJK0 312 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 CORO1CQ9ULV4 474 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms