RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CPVLQ9H3G5 476 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 SAP30BPQ9UHR5 308 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 LEMD3Q9Y2U8 911 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 TECP42680 631 aa18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 RRP36Q96EU6 259 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 CALML4Q96GE6 196 aa18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 SEC63Q9UGP8 760 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 FCER1AP12319 257 aa18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 CKAP4Q07065 602 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 MUM1L1Q5H9M0 696 aa18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 FKBP15Q5T1M5 1219 aa18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 TSPYL1Q9H0U9 437 aa18.42■□□□□ 0.54
SEMA3B-207ENST00000441915 GNPATO15228 680 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 KLK7P49862 253 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 USP14P54578 494 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 ZSCAN26Q16670 478 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 FIGNQ5HY92 759 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 CCDC102AQ96A19 550 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 ERGIC2Q96RQ1 377 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 EYA3Q99504 573 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 RASSF10A6NK89 507 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 ZNF804AQ7Z570 1209 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 ZSCAN29Q8IWY8 852 aaPredicted RBP18.41■□□□□ 0.54
SEMA3B-207ENST00000441915 A0A1W2PQJ5 194 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 SRGAP2O75044 1071 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 N4BP1O75113 896 aaKnown RBP18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 GRIK5Q16478 980 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 MIIPQ5JXC2 388 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 TBCKQ8TEA7 893 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 IQCDQ96DY2 449 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 LACRTQ9GZZ8 138 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 ANO9A1A5B4 782 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 CDK8P49336 464 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 KIF5AQ12840 1032 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 ORC2Q13416 577 aaPredicted RBP18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 COBLL1Q53SF7 1204 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 USP17L2Q6R6M4 530 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 FAM71BQ8TC56 605 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 CAPZA3Q96KX2 299 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 NAV1Q8NEY1 1877 aa18.4■□□□□ 0.54
SEMA3B-207ENST00000441915 COL24A1Q17RW2 1714 aa18.39■□□□□ 0.54
SEMA3B-207ENST00000441915 CDK17Q00537 523 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 CCDC42Q96M95 316 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 VAT1LQ9HCJ6 419 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 RCCD1A6NED2 376 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 LRRIQ3A6PVS8 624 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 SMARCA1P28370 1054 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 SPA17Q15506 151 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 C16orf86Q6ZW13 317 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 REXO1Q8N1G1 1221 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 GOLGA5Q8TBA6 731 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 MMTAG2Q9BU76 263 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 RTFDC1Q9BY42 306 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 TSGA10Q9BZW7 698 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 MED4Q9NPJ6 270 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 FAN1Q9Y2M0 1017 aa18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-207ENST00000441915 GRAPQ13588 217 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 KIAA0895Q8NCT3 520 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 GRAPLQ8TC17 118 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 CAGE1Q8TC20 777 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 ZBTB9Q96C00 473 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 TARSL2A2RTX5 802 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 IDEP14735 1019 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 TXKP42681 527 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 BTDP43251 543 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 VAV2P52735 878 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 CYP27A1Q02318 531 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 NFIXQ14938 502 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 SECISBP2LQ93073 1101 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 TRIM34Q9BYJ4 488 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 VIPAS39Q9H9C1 493 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 SLC39A2Q9NP94 309 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 JADE2Q9NQC1 790 aa18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 CWC15Q9P013 229 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 BIN2Q9UBW5 565 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-207ENST00000441915 MACROD2A1Z1Q3 448 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 ACTN2P35609 894 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 CENPPQ6IPU0 288 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 PIGSQ96S52 555 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 LEKR1Q6ZMV7 388 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 HPS3Q969F9 1004 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 PURBQ96QR8 312 aaKnown RBP18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 SEMA6BQ9H3T3 888 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 LRWD1Q9UFC0 647 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 DUSP10Q9Y6W6 482 aa18.37■□□□□ 0.53
SEMA3B-207ENST00000441915 SNED1Q8TER0 1413 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms