RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 NBPF5PQ86XG9 351 aaPredicted RBP7.76□□□□□ -1.17
CHD6-204ENST00000440647 TAOK3Q9H2K8 898 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 C1GALT1Q9NS00 363 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 PARP2Q9UGN5 583 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 SLX4Q8IY92 1834 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 DYNC1LI2O43237 492 aaPredicted RBP7.75□□□□□ -1.17
CHD6-204ENST00000440647 PPP2R1AP30153 589 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
CHD6-204ENST00000440647 ERVK-24P63145 666 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 DAB2P98082 770 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 TTLL4Q14679 1199 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 RASIP1Q5U651 963 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 PCNX4Q63HM2 1172 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 STYK1Q6J9G0 422 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 LLGL2Q6P1M3 1020 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 DHX37Q8IY37 1157 aaKnown RBP7.75□□□□□ -1.17
CHD6-204ENST00000440647 SMYD4Q8IYR2 804 aaPredicted RBP7.75□□□□□ -1.17
CHD6-204ENST00000440647 DNAJC5GQ8N7S2 189 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 MASTLQ96GX5 879 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 USP16Q9Y5T5 823 aa7.75□□□□□ -1.17
CHD6-204ENST00000440647 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 FAM170BA6NMN3 283 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
CHD6-204ENST00000440647 RNGTTO60942 597 aaKnown RBP7.74□□□□□ -1.17
CHD6-204ENST00000440647 FOSL1P15407 271 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 PRELPP51888 382 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 CYP27A1Q02318 531 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 CLEC4GQ6UXB4 293 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 FBXO33Q7Z6M2 555 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 RNF214Q8ND24 703 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 PCOLCE2Q9UKZ9 415 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 ANGEL1Q9UNK9 670 aaKnown RBP7.74□□□□□ -1.17
CHD6-204ENST00000440647 NIP7Q9Y221 180 aaKnown RBP eCLIP7.74□□□□□ -1.17
CHD6-204ENST00000440647 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 LTBP3Q9NS15 1303 aa7.74□□□□□ -1.17
CHD6-204ENST00000440647 PRAMEF22A3QJZ6 481 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 SRGNP10124 158 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
CHD6-204ENST00000440647 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
CHD6-204ENST00000440647 PSMD2Q13200 908 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 DCTN1Q14203 1278 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 TAF7Q15545 349 aaPredicted RBP7.73□□□□□ -1.17
CHD6-204ENST00000440647 CCDC93Q567U6 631 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 OGFOD3Q6PK18 319 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 MAPK8IP3Q9UPT6 1336 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 SCN4AP35499 1836 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 NUP98P52948 1817 aa7.73□□□□□ -1.17
CHD6-204ENST00000440647 CYP26A1O43174 497 aa7.72□□□□□ -1.17
CHD6-204ENST00000440647 NPR1P16066 1061 aa7.72□□□□□ -1.17
CHD6-204ENST00000440647 KIF6Q6ZMV9 814 aa7.72□□□□□ -1.17
CHD6-204ENST00000440647 TMC4Q7Z404 712 aa7.72□□□□□ -1.17
CHD6-204ENST00000440647 FAM177A1Q8N128 213 aaPredicted RBP7.72□□□□□ -1.17
CHD6-204ENST00000440647 JMYQ8N9B5 988 aa7.72□□□□□ -1.17
CHD6-204ENST00000440647 PNISRQ8TF01 805 aaKnown RBP7.72□□□□□ -1.17
CHD6-204ENST00000440647 PNNQ9H307 717 aaKnown RBP7.72□□□□□ -1.17
CHD6-204ENST00000440647 CEP350Q5VT06 3117 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 IQCA1LA6NCM1 817 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 DDNO94850 711 aaPredicted RBP7.71□□□□□ -1.18
CHD6-204ENST00000440647 ALDH1B1P30837 517 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 RING1Q06587 406 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 CCDC85BQ15834 202 aaPredicted RBP7.71□□□□□ -1.18
CHD6-204ENST00000440647 TAF7LQ5H9L4 462 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 TTBK2Q6IQ55 1244 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 ZNF765Q7L2R6 523 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 ISL2Q96A47 359 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 NYXQ9GZU5 481 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 SSU72Q9NP77 194 aaKnown RBP7.71□□□□□ -1.18
CHD6-204ENST00000440647 PCDHA4Q9UN74 947 aa7.71□□□□□ -1.18
CHD6-204ENST00000440647 DCDC2CA8MYV0 355 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 RPS26P62854 115 aaKnown RBP7.7□□□□□ -1.18
CHD6-204ENST00000440647 CYP27C1Q4G0S4 372 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 PPM1JQ5JR12 505 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 C12orf40Q86WS4 652 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 RTKN2Q8IZC4 609 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 FBXL18Q96ME1 805 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 MIS18AQ9NYP9 233 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 RRP7AQ9Y3A4 280 aaKnown RBP7.7□□□□□ -1.18
CHD6-204ENST00000440647 CSADQ9Y600 493 aa7.7□□□□□ -1.18
CHD6-204ENST00000440647 FANCGO15287 622 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 ADAMTS4O75173 837 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 HSPA1AP0DMV8 641 aaKnown RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 HSPA1BP0DMV9 641 aaKnown RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 MYL6BP14649 208 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 PTPN11Q06124 597 aaPredicted RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 CDK5R2Q13319 367 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 TAF1CQ15572 869 aaPredicted RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 HLFQ16534 295 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 MSMPQ1L6U9 139 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 MEI1Q5TIA1 1274 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
CHD6-204ENST00000440647 RPGRQ92834 1020 aaKnown RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 FAM161BQ96MY7 647 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 ZNF277Q9NRM2 450 aaPredicted RBP7.69□□□□□ -1.18
CHD6-204ENST00000440647 MAP3K15Q6ZN16 1313 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
CHD6-204ENST00000440647 ERVV-1B6SEH8 477 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms