RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 SALL3Q9BXA9 1300 aa22.58■■□□□ 1.2
FMR1-208ENST00000440235 PPP1R21Q6ZMI0 780 aa22.58■■□□□ 1.2
FMR1-208ENST00000440235 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 FAM205CA6NFA0 338 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 EIF4E1BA6NMX2 242 aaKnown RBP22.57■■□□□ 1.2
FMR1-208ENST00000440235 PCCAP05165 728 aaPredicted RBP22.57■■□□□ 1.2
FMR1-208ENST00000440235 AMFRQ9UKV5 643 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 GUCY1A2P33402 732 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 PABPC4Q13310 644 aaKnown RBP eCLIP22.57■■□□□ 1.2
FMR1-208ENST00000440235 NNTQ13423 1086 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 GKAP1Q5VSY0 366 aaPredicted RBP22.57■■□□□ 1.2
FMR1-208ENST00000440235 KRT26Q7Z3Y9 468 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 IMPG2Q9BZV3 1241 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 NHEJ1Q9H9Q4 299 aaPredicted RBP22.57■■□□□ 1.2
FMR1-208ENST00000440235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.57■■□□□ 1.29e-8■■■□□ 19.1
FMR1-208ENST00000440235 LRRN2O75325 713 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 RASGRF1Q13972 1273 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 NEK8Q86SG6 692 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 PHLDB2Q86SQ0 1253 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 FAM133AQ8N9E0 248 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 OSBPL5Q9H0X9 879 aaPredicted RBP22.57■■□□□ 1.2
FMR1-208ENST00000440235 TFR2Q9UP52 801 aa22.57■■□□□ 1.2
FMR1-208ENST00000440235 ARHGEF35A5YM69 484 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 H2AFZP0C0S5 128 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 PPP2R5DQ14738 602 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 H2AFVQ71UI9 128 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 KIAA1024Q9UPX6 916 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 NMT2O60551 498 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 PLTPP55058 493 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 VSNL1P62760 191 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 THOC1Q96FV9 657 aaKnown RBP22.56■■□□□ 1.2
FMR1-208ENST00000440235 MEIS1O00470 390 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 ATP11AP98196 1134 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 USP17L2Q6R6M4 530 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 COA7Q96BR5 231 aa22.56■■□□□ 1.2
FMR1-208ENST00000440235 CLIC2O15247 247 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 TBC1D8O95759 1140 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 STX2P32856 288 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 SLC16A2P36021 539 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 SCNN1DP51172 638 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 UBXN2AP68543 259 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 PEAK1Q9H792 1746 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 USP17L8P0C7I0 530 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 PLCG2P16885 1265 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 GTF2IP78347 998 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 SRPRBQ9Y5M8 271 aaKnown RBP22.55■■□□□ 1.2
FMR1-208ENST00000440235 C1orf167Q5SNV9 1468 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 VIRMAQ69YN4 1812 aaKnown RBP22.55■■□□□ 1.2
FMR1-208ENST00000440235 EIF3CLB5ME19 914 aaKnown RBP22.55■■□□□ 1.2
FMR1-208ENST00000440235 ALDH3A1P30838 453 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 PPP1R2P41236 205 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 PPP2R5BQ15173 497 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 EIF3CQ99613 913 aaKnown RBP22.55■■□□□ 1.2
FMR1-208ENST00000440235 ANKRD2Q9GZV1 360 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 PANK4Q9NVE7 773 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 ADGRG1Q9Y653 693 aa22.55■■□□□ 1.2
FMR1-208ENST00000440235 NCK2O43639 380 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 UBL4BQ8N7F7 174 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 MLXIPQ9HAP2 919 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 MYCLP12524 364 aaPredicted RBP22.54■■□□□ 1.2
FMR1-208ENST00000440235 GGCXP38435 758 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 P2RX5Q93086 422 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 RNF26Q9BY78 433 aaPredicted RBP22.54■■□□□ 1.2
FMR1-208ENST00000440235 TRIM10Q9UDY6 481 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 USP17L3A6NCW0 530 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 USP17L4A6NCW7 530 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 PTPREP23469 700 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 GCKP35557 465 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 HAUS3Q68CZ6 603 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 USP17L1Q7RTZ2 530 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 STMN2Q93045 179 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 CHP1Q99653 195 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 FAM184BQ9ULE4 1060 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 UBE2Q2LH0YL09 131 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 DIXDC1Q155Q3 683 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 MFSD14BQ5SR56 506 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 FMNL3Q8IVF7 1028 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 FNBP1Q96RU3 617 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 NAP1L3Q99457 506 aaPredicted RBP22.54■■□□□ 1.2
FMR1-208ENST00000440235 GINS2Q9Y248 185 aa22.54■■□□□ 1.2
FMR1-208ENST00000440235 TADA3O75528 432 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 HSPA1LP34931 641 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 PARP10Q53GL7 1025 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 CNBD1Q8NA66 436 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 IFT74Q96LB3 600 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 SWAP70Q9UH65 585 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 PACSIN2Q9UNF0 486 aaPredicted RBP22.53■■□□□ 1.2
FMR1-208ENST00000440235 NEDD4P46934 1319 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 GOLGA8KD6RF30 607 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 ARL1P40616 181 aaPredicted RBP22.53■■□□□ 1.2
FMR1-208ENST00000440235 FMR1Q06787 632 aaKnown RBP eCLIP22.53■■□□□ 1.2
FMR1-208ENST00000440235 MESDQ14696 234 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 PSMD6Q15008 389 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 FAM133BQ5BKY9 247 aaKnown RBP22.53■■□□□ 1.2
FMR1-208ENST00000440235 VPS37BQ9H9H4 285 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 NOVA2Q9UNW9 492 aaKnown RBP22.53■■□□□ 1.2
FMR1-208ENST00000440235 AKAP12Q02952 1782 aa22.53■■□□□ 1.2
FMR1-208ENST00000440235 PXDNQ92626 1479 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms