RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TAF4BQ92750 862 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
SMPD4-209ENST00000439886 ZKSCAN4Q969J2 545 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-209ENST00000439886 GREM2Q9H772 168 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 SLC40A1Q9NP59 571 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 A0A1B0GUA9 196 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 SETSIPP0DME0 302 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 RINLQ6ZS11 566 aa12.94□□□□□ -0.34
SMPD4-209ENST00000439886 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
SMPD4-209ENST00000439886 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
SMPD4-209ENST00000439886 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMPD4-209ENST00000439886 EME2A4GXA9 379 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-209ENST00000439886 PPP1R37O75864 691 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 CYP7A1P22680 504 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 PAK2Q13177 524 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 TRADDQ15628 312 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 LCORLQ8N3X6 602 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 AENQ8WTP8 325 aaKnown RBP12.93□□□□□ -0.34
SMPD4-209ENST00000439886 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 PLAAQ9Y263 795 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 SEMA3EO15041 775 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 LIFRP42702 1097 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 GPKOWQ92917 476 aaPredicted RBP eCLIP12.93□□□□□ -0.34
SMPD4-209ENST00000439886 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 PTPRUQ92729 1446 aa12.93□□□□□ -0.34
SMPD4-209ENST00000439886 CDC25CP30307 473 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 KIF11P52732 1056 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 CASP7P55210 303 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 GFPT1Q06210 699 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 UHMK1Q8TAS1 419 aaKnown RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 SELENOSQ9BQE4 189 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 EPN3Q9H201 632 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 ZHX3Q9H4I2 956 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 EPB41L4AQ9HCS5 686 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 ENO4A6NNW6 628 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 BUB1BO60566 1050 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 GLI1P08151 1106 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 MYZAPP0CAP1 466 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 CTNNA1P35221 906 aaKnown RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 ALS2CLQ60I27 953 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 HIBCHQ6NVY1 386 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 DYMQ7RTS9 669 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 DDX42Q86XP3 938 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 MSL3Q8N5Y2 521 aaKnown RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 ESR2Q92731 530 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 TCP1P17987 556 aaKnown RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 PRPF4BQ13523 1007 aaKnown RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 FAM47AQ5JRC9 791 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 EMBQ6PCB8 327 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
SMPD4-209ENST00000439886 ZNF483Q8TF39 744 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-209ENST00000439886 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-209ENST00000439886 ZBED6P86452 979 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 CREG2Q8IUH2 290 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 MYCBPAPQ8TBZ2 947 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 TBX22Q9Y458 520 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 ADAMTS13Q76LX8 1427 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 ADAT2Q7Z6V5 191 aaKnown RBP12.91□□□□□ -0.34
SMPD4-209ENST00000439886 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-209ENST00000439886 GGT7Q9UJ14 662 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 NOVA2Q9UNW9 492 aaKnown RBP12.91□□□□□ -0.34
SMPD4-209ENST00000439886 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
SMPD4-209ENST00000439886 OPLAHO14841 1288 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 CEP104O60308 925 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 MARCH6O60337 910 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 EPS15P42566 896 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 PTGISQ16647 500 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 KRT28Q7Z3Y7 464 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 ARL10Q8N8L6 244 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 TATDN2Q93075 761 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 COQ9O75208 318 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 BMP15O95972 392 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
SMPD4-209ENST00000439886 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-209ENST00000439886 FNBP4Q8N3X1 1017 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-209ENST00000439886 AP1M1Q9BXS5 423 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms