RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 TXNRD2Q9NNW7 524 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 ABCB11O95342 1321 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 MYPNQ86TC9 1320 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 PDHXO00330 501 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 CNMDO75829 334 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 SLC10A3P09131 477 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 ANO1Q5XXA6 986 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 LRSAM1Q6UWE0 723 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
CBX5-202ENST00000439541 BICD2Q8TD16 824 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 SPATA32Q96LK8 384 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 ZNF396Q96N95 335 aaPredicted RBP11.42□□□□□ -0.58
CBX5-202ENST00000439541 R3HDMLQ9H3Y0 253 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 RNF146Q9NTX7 359 aa11.42□□□□□ -0.58
CBX5-202ENST00000439541 FAM155AB1AL88 458 aaPredicted RBP11.41□□□□□ -0.58
CBX5-202ENST00000439541 TPM2P07951 284 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 MRPL12P52815 198 aaKnown RBP11.41□□□□□ -0.58
CBX5-202ENST00000439541 NONOQ15233 471 aaKnown RBP eCLIP11.41□□□□□ -0.58
CBX5-202ENST00000439541 RILPL1Q5EBL4 403 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 SLC30A10Q6XR72 485 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
CBX5-202ENST00000439541 KRT25Q7Z3Z0 450 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 FCHSD1Q86WN1 690 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 GPT2Q8TD30 523 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 TBCKQ8TEA7 893 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 ZIC5Q96T25 663 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 TEX13BQ9BXU2 312 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 HOXC10Q9NYD6 342 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 RTEL1Q9NZ71 1219 aa11.41□□□□□ -0.58
CBX5-202ENST00000439541 MRPL11Q9Y3B7 192 aaKnown RBP11.41□□□□□ -0.58
CBX5-202ENST00000439541 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.586e-6■■■□□ 18.4
CBX5-202ENST00000439541 EDIL3O43854 480 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 STK38Q15208 465 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 PTPAQ15257 358 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 ZNF174Q15697 407 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 TMEM87AQ8NBN3 555 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 LINC00301Q8NCQ3 95 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 PDLIM2Q96JY6 352 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
CBX5-202ENST00000439541 ANO3Q9BYT9 981 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 COL20A1Q9P218 1284 aa11.4□□□□□ -0.58
CBX5-202ENST00000439541 NOL7Q9UMY1 257 aaKnown RBP11.4□□□□□ -0.58
CBX5-202ENST00000439541 OSBPP22059 807 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
CBX5-202ENST00000439541 MCM7P33993 719 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 OAZ1P54368 228 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 UBXN2AP68543 259 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 FSTL1Q12841 308 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 PABPC4Q13310 644 aaKnown RBP eCLIP11.39□□□□□ -0.59
CBX5-202ENST00000439541 LETM2Q2VYF4 491 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 CYP4F22Q6NT55 531 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 NSMFQ6X4W1 530 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
CBX5-202ENST00000439541 SCAND2PQ9GZW5 306 aaPredicted RBP11.39□□□□□ -0.59
CBX5-202ENST00000439541 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
CBX5-202ENST00000439541 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 GCOM1H8Y6P7 765 aaPredicted RBP11.39□□□□□ -0.59
CBX5-202ENST00000439541 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 ATP2A1O14983 1001 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 TDP2O95551 362 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 YEATS4O95619 227 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 POLR2MP0CAP2 368 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 FDX1P10109 184 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 STAT3P40763 770 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 TERF1P54274 439 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 GRIN1Q05586 938 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.39□□□□□ -0.59
CBX5-202ENST00000439541 ANKRD23Q86SG2 305 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 NEK8Q86SG6 692 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 RBPJLQ9UBG7 517 aa11.39□□□□□ -0.59
CBX5-202ENST00000439541 ELP1O95163 1332 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 SPDYE3A6NKU9 549 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 SPTLC2O15270 562 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 SLC37A4O43826 429 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
CBX5-202ENST00000439541 ME1P48163 572 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 HSD17B4P51659 736 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 HTRA3P83110 453 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 TRAF1Q13077 416 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 AP3B2Q13367 1082 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 Q3C1V9 767 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 ATL3Q6DD88 541 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 MB21D1Q8N884 522 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
CBX5-202ENST00000439541 UIMC1Q96RL1 719 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
CBX5-202ENST00000439541 RBSNQ9H1K0 784 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 RCOR1Q9UKL0 485 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 MYH7BA7E2Y1 1941 aa11.38□□□□□ -0.59
CBX5-202ENST00000439541 CCNT1O60563 726 aaKnown RBP11.37□□□□□ -0.59
CBX5-202ENST00000439541 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
CBX5-202ENST00000439541 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
CBX5-202ENST00000439541 SLC39A14Q15043 492 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms