RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 MYCP01106 439 aaPredicted RBP19.52■□□□□ 0.72
TARDBP-203ENST00000439080 PRKAR2AP13861 404 aaKnown RBP19.52■□□□□ 0.72
TARDBP-203ENST00000439080 UBXN2AP68543 259 aa19.52■□□□□ 0.72
TARDBP-203ENST00000439080 WWC2Q6AWC2 1192 aa19.52■□□□□ 0.72
TARDBP-203ENST00000439080 RGS22Q8NE09 1264 aa19.52■□□□□ 0.72
TARDBP-203ENST00000439080 GTF3C6Q969F1 213 aa19.52■□□□□ 0.72
TARDBP-203ENST00000439080 PURBQ96QR8 312 aaKnown RBP19.52■□□□□ 0.72
TARDBP-203ENST00000439080 SLC26A6Q9BXS9 759 aa19.52■□□□□ 0.72
TARDBP-203ENST00000439080 RNF26Q9BY78 433 aaPredicted RBP19.52■□□□□ 0.72
TARDBP-203ENST00000439080 RBM27Q9P2N5 1060 aaKnown RBP19.52■□□□□ 0.72
TARDBP-203ENST00000439080 CFBP00751 764 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 IGHA2P01877 340 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 CYP2C19P33261 490 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 PFKFB3Q16875 520 aaPredicted RBP19.51■□□□□ 0.71
TARDBP-203ENST00000439080 MFSD14CQ5VZR4 134 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 CPLX2Q6PUV4 134 aaKnown RBP19.51■□□□□ 0.71
TARDBP-203ENST00000439080 ZNF467Q7Z7K2 595 aaPredicted RBP19.51■□□□□ 0.71
TARDBP-203ENST00000439080 NECAB1Q8N987 351 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 TBC1D5Q92609 795 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 TINF2Q9BSI4 451 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
TARDBP-203ENST00000439080 SOWAHBA6NEL2 793 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 hCG_1984214I3L0E3 225 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 PRPF3O43395 683 aaKnown RBP19.5■□□□□ 0.71
TARDBP-203ENST00000439080 SCG2P13521 617 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 HSD17B4P51659 736 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 AKAP17AQ02040 695 aaKnown RBP19.5■□□□□ 0.71
TARDBP-203ENST00000439080 GHRHRQ02643 423 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 MAP3K21Q5TCX8 1036 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 TRIM22Q8IYM9 498 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 ZNF713Q8N859 430 aaPredicted RBP19.5■□□□□ 0.71
TARDBP-203ENST00000439080 MAF1Q9H063 256 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 COL20A1Q9P218 1284 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 SYNGAP1Q96PV0 1343 aa19.5■□□□□ 0.71
TARDBP-203ENST00000439080 KIAA1217Q5T5P2 1943 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 STXBP3O00186 592 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 CDKL5O76039 1030 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 HOXA13P31271 388 aaPredicted RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 ALDH5A1P51649 535 aaPredicted RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 NAPAP54920 295 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 CACNB2Q08289 660 aaPredicted RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 MTFR1Q15390 333 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 TYW1BQ6NUM6 668 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 PPP1R18Q6NYC8 613 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 MAMDC4Q6UXC1 1216 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 MSL3Q8N5Y2 521 aaKnown RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 SYTL5Q8TDW5 730 aaPredicted RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 BARHL2Q9NY43 387 aa19.49■□□□□ 0.71
TARDBP-203ENST00000439080 ADD3Q9UEY8 706 aaKnown RBP19.49■□□□□ 0.71
TARDBP-203ENST00000439080 SSRP1Q08945 709 aaKnown RBP19.48■□□□□ 0.71
TARDBP-203ENST00000439080 ST3GAL1Q11201 340 aa19.48■□□□□ 0.71
TARDBP-203ENST00000439080 PKN1Q16512 942 aa19.48■□□□□ 0.71
TARDBP-203ENST00000439080 ARMCX2Q7L311 632 aa19.48■□□□□ 0.71
TARDBP-203ENST00000439080 IL27Q8NEV9 243 aa19.48■□□□□ 0.71
TARDBP-203ENST00000439080 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
TARDBP-203ENST00000439080 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
TARDBP-203ENST00000439080 GCOM1H8Y6P7 765 aaPredicted RBP19.47■□□□□ 0.71
TARDBP-203ENST00000439080 CD2BP2O95400 341 aaKnown RBP19.47■□□□□ 0.71
TARDBP-203ENST00000439080 POLR2MP0CAP2 368 aa19.47■□□□□ 0.71
TARDBP-203ENST00000439080 CYBAP13498 195 aa19.47■□□□□ 0.71
TARDBP-203ENST00000439080 CCL5P13501 91 aa19.47■□□□□ 0.71
TARDBP-203ENST00000439080 SAMD3Q8N6K7 520 aa19.47■□□□□ 0.71
TARDBP-203ENST00000439080 MAP3K20Q9NYL2 800 aaKnown RBP19.47■□□□□ 0.71
TARDBP-203ENST00000439080 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
TARDBP-203ENST00000439080 ASB14A6NK59 587 aa19.46■□□□□ 0.71
TARDBP-203ENST00000439080 DEXIO95424 95 aa19.46■□□□□ 0.71
TARDBP-203ENST00000439080 CTDNEP1O95476 244 aa19.46■□□□□ 0.71
TARDBP-203ENST00000439080 CCND3P30281 292 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-203ENST00000439080 TRPV1Q8NER1 839 aa19.46■□□□□ 0.71
TARDBP-203ENST00000439080 DNERQ8NFT8 737 aa19.46■□□□□ 0.71
TARDBP-203ENST00000439080 ZSCAN31Q96LW9 406 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-203ENST00000439080 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.46■□□□□ 0.71
TARDBP-203ENST00000439080 HMX1Q9NP08 348 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-203ENST00000439080 SH2B1Q9NRF2 756 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-203ENST00000439080 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-203ENST00000439080 RPTORQ8N122 1335 aa19.46■□□□□ 0.71
TARDBP-203ENST00000439080 CCDC85CA6NKD9 419 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 PIK3CDO00329 1044 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 DTNBO60941 627 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 SNAI1O95863 264 aaPredicted RBP19.45■□□□□ 0.7
TARDBP-203ENST00000439080 CCDC83Q8IWF9 413 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 CUL5Q93034 780 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 TAAR1Q96RJ0 339 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 RNF208Q9H0X6 261 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 PSTPIP2Q9H939 334 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 PAK6Q9NQU5 681 aaPredicted RBP19.45■□□□□ 0.7
TARDBP-203ENST00000439080 CNPY2Q9Y2B0 182 aa19.45■□□□□ 0.7
TARDBP-203ENST00000439080 LOC102724159A0A0B4J2E5 919 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 MEIS2O14770 477 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 ADCY7P51828 1080 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 PWP2Q15269 919 aaKnown RBP19.44■□□□□ 0.7
TARDBP-203ENST00000439080 UBE2SQ16763 222 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 PRAMEF19Q5SWL8 479 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 USP17L6PQ6QN14 398 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 FCHSD1Q86WN1 690 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 NSUN7Q8NE18 718 aaKnown RBP19.44■□□□□ 0.7
TARDBP-203ENST00000439080 SMARCC2Q8TAQ2 1214 aa19.44■□□□□ 0.7
TARDBP-203ENST00000439080 CCDC12Q8WUD4 166 aaPredicted RBP19.44■□□□□ 0.7
TARDBP-203ENST00000439080 RMDN3Q96TC7 470 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms