RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SGMS1Q86VZ5 419 aa28.7■■■□□ 2.18
RAPGEF1-206ENST00000438647 MYL10Q9BUA6 226 aa28.7■■■□□ 2.18
RAPGEF1-206ENST00000438647 LRRC2Q9BYS8 371 aa28.7■■■□□ 2.18
RAPGEF1-206ENST00000438647 PCDHA1Q9Y5I3 950 aa28.7■■■□□ 2.18
RAPGEF1-206ENST00000438647 LCTP09848 1927 aa28.7■■■□□ 2.18
RAPGEF1-206ENST00000438647 ALPK3Q96L96 1907 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 PNMA6FA0A0J9YX94 578 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 EPB41L2O43491 1005 aaKnown RBP28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 CYTH3O43739 400 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 SMARCA1P28370 1054 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 ADCYAP1R1P41586 468 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 TNFAIP2Q03169 654 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 COL9A3Q14050 684 aaPredicted RBP28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 SYNE3Q6ZMZ3 975 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 FBXO16Q8IX29 292 aaPredicted RBP28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 PIGSQ96S52 555 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 TSEN34Q9BSV6 310 aaKnown RBP28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 SPZ1Q9BXG8 430 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 PHF24Q9UPV7 400 aa28.69■■■□□ 2.18
RAPGEF1-206ENST00000438647 HSPA4P34932 840 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 ATN1P54259 1190 aaPredicted RBP28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 PDE4DQ08499 809 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 ADCK5Q3MIX3 580 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 IQSEC1Q6DN90 963 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 NOL8Q76FK4 1167 aaKnown RBP28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 EEPD1Q7L9B9 569 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 KCNB2Q92953 911 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 DNAH12Q6ZR08 3092 aa28.68■■■□□ 2.18
RAPGEF1-206ENST00000438647 C6orf222P0C671 652 aaPredicted RBP28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 CST5P28325 142 aaPredicted RBP28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 GJA9P57773 515 aa28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 EXOSC10Q01780 885 aaKnown RBP28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 SLC35G1Q2M3R5 365 aa28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 SAMD3Q8N6K7 520 aa28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 KLHDC9Q8NEP7 349 aa28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 SYTL5Q8TDW5 730 aaPredicted RBP28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 UPF3AQ9H1J1 476 aaKnown RBP28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 MAP3K20Q9NYL2 800 aaKnown RBP28.67■■■□□ 2.18
RAPGEF1-206ENST00000438647 MOXD2PA6NHM9 499 aa28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 ADCY6O43306 1168 aa28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 PPP1R11O60927 126 aaPredicted RBP28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 EDNRBP24530 442 aa28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 TAPT1Q6NXT6 567 aa28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 SLC39A5Q6ZMH5 540 aa28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 PCSK9Q8NBP7 692 aaKnown RBP28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 DDX49Q9Y6V7 483 aaKnown RBP28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 LRRC37A2A6NM11 1700 aa28.66■■■□□ 2.18
RAPGEF1-206ENST00000438647 CFBP00751 764 aa28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 GHRHRQ02643 423 aa28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 NSUN6Q8TEA1 469 aaKnown RBP28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 TBC1D5Q92609 795 aa28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 FERMT2Q96AC1 680 aa28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 RRP36Q96EU6 259 aaKnown RBP28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 SEC63Q9UGP8 760 aaKnown RBP28.65■■■□□ 2.18
RAPGEF1-206ENST00000438647 BAZ2BQ9UIF8 2168 aaKnown RBP28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 C1orf53Q5VUE5 145 aa28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 MICU3Q86XE3 530 aa28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 AP5M1Q9H0R1 490 aa28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 PDGFCQ9NRA1 345 aa28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 GNEQ9Y223 722 aaKnown RBP28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 Q9Y3F1 56 aa28.64■■■□□ 2.18
RAPGEF1-206ENST00000438647 A0A1W2PQ45 241 aaPredicted RBP28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 A0A1W2PQY0 241 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 RXRAP19793 462 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 HSD17B4P51659 736 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 ACLYP53396 1101 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 RTP1P59025 263 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 NKX3-2P78367 333 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 FGD1P98174 961 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 SNX17Q15036 470 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 KCNA10Q16322 511 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 TLK2Q86UE8 772 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 FANCBQ8NB91 859 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 JAKMIP1Q96N16 626 aaKnown RBP28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 IWS1Q96ST2 819 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 RMDN3Q96TC7 470 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 SNX14Q9Y5W7 946 aa28.63■■■□□ 2.17
RAPGEF1-206ENST00000438647 OPLAHO14841 1288 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 SMPD1P17405 629 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 GNASQ5JWF2 1037 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 CCSAPQ6IQ19 270 aaPredicted RBP28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 APOA5Q6Q788 366 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 CHRDL2Q6WN34 429 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 TCEANC2Q96MN5 208 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 TAAR1Q96RJ0 339 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 COL20A1Q9P218 1284 aa28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 ZMYND8Q9ULU4 1186 aaPredicted RBP28.62■■■□□ 2.17
RAPGEF1-206ENST00000438647 RBM47A0AV96 593 aaKnown RBP28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 MYADML2A6NDP7 307 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 PLEKHA8P1O95397 391 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 PSMA5P28066 241 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 DUSP28Q4G0W2 176 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 ARHGEF16Q5VV41 709 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 BLOC1S2Q6QNY1 142 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 SRBD1Q8N5C6 995 aaKnown RBP28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 PIBF1Q8WXW3 757 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 GLT1D1Q96MS3 346 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 WDR11Q9BZH6 1224 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 STARD7Q9NQZ5 370 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms