RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KIF3BO15066 747 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 ANP32CO43423 234 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 GRIN3BO60391 1043 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 BUB1BO60566 1050 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 COPB2P35606 906 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 KCNC1P48547 511 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 YBX1P67809 324 aaKnown RBP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 POU5F1BQ06416 359 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 BNC2Q6ZN30 1099 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 FRMD5Q7Z6J6 570 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 IGDCC3Q8IVU1 814 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 SLFN12Q8IYM2 578 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 SYTL5Q8TDW5 730 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 TCTN2Q96GX1 697 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 MPHOSPH6Q99547 160 aaKnown RBP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 NAP1L4Q99733 375 aaKnown RBP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 ARPC5LQ9BPX5 153 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 PAGR1Q9BTK6 254 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMX1Q9H3N1 280 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 CHST12Q9NRB3 414 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 USP40Q9NVE5 1235 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 REV1Q9UBZ9 1251 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 PCDHGB7Q9Y5F8 929 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 SCINQ9Y6U3 715 aa4.61□□□□□ -1.67
HMGB1P12-201ENST00000438594 ITGAEP38570 1179 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMEM62Q0P6H9 643 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 EFEMP1Q12805 493 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 PSMD2Q13200 908 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 VPS72Q15906 364 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMEM201Q5SNT2 666 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 UBXN11Q5T124 520 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 SYCP2LQ5T4T6 812 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 MEI1Q5TIA1 1274 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 EFCAB2Q5VUJ9 269 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 NBPF6Q5VWK0 638 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 GALNT18Q6P9A2 607 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 VPS37DQ86XT2 251 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 ZNF654Q8IZM8 581 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 SAMD3Q8N6K7 520 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 ENOX1Q8TC92 643 aaKnown RBP4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 NBPF4Q96M43 638 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 HDAC8Q9BY41 377 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 CASS4Q9NQ75 786 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 KLHL14Q9P2G3 628 aa4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 GPR55Q9Y2T6 319 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMEM82A0PJX8 343 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 K7ESM1 405 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 PRICKLE3O43900 615 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 PLIN1O60240 522 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 COL6A1P12109 1028 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 RLBP1P12271 317 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 PRKCAP17252 672 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 ATF4P18848 351 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 CALRP27797 417 aaKnown RBP4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 MAN1A1P33908 653 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 LIMS1P48059 325 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 GJA8P48165 433 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 ERVFRD-1P60508 538 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 POU5F1Q01860 360 aaKnown RBP4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 CCDC184Q52MB2 194 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMC3Q7Z5M5 1100 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 USP48Q86UV5 1035 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 WDR75Q8IWA0 830 aaKnown RBP4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 CKAP2LQ8IYA6 745 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 NUP43Q8NFH3 380 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 SLKQ9H2G2 1235 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 KANSL2Q9H9L4 492 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 ARNT2Q9HBZ2 717 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 FANCLQ9NW38 375 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 ZNF281Q9Y2X9 895 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 AK5Q9Y6K8 562 aa4.59□□□□□ -1.67
HMGB1P12-201ENST00000438594 RPGRIP1LQ68CZ1 1315 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 A0A1W2PQ27 194 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 A0A1W2PQ64 194 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 A0A1W2PQC6 194 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 A0A1W2PQD8 194 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 WTIPA6NIX2 430 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 MEIS1O00470 390 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 CAND2O75155 1236 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 CDC45O75419 566 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 HTR3BO95264 441 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 HSP90AA1P07900 732 aaKnown RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 PFKLP17858 780 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 RNF4P78317 190 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 CYP4F8P98187 520 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 HDAC1Q13547 482 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 LAPTM5Q13571 262 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 MAPRE1Q15691 268 aaKnown RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZRSR2Q15696 482 aaKnown RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZNF827Q17R98 1081 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 HSF5Q4G112 596 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 ICE2Q659A1 982 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 HHIPL2Q6UWX4 724 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 KIAA0907Q7Z7F0 614 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 LSRQ86X29 649 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 ZNF655Q8N720 491 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 TP53I13Q8NBR0 393 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 DAGLBQ8NCG7 672 aa4.58□□□□□ -1.68
HMGB1P12-201ENST00000438594 C1orf131Q8NDD1 294 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms