RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 TRAF1Q13077 416 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 ME3Q16798 604 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 OLFML2BQ68BL8 750 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 SLC26A6Q9BXS9 759 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 DIS3Q9Y2L1 958 aaKnown RBP18.66■□□□□ 0.58
SNRPB-202ENST00000438552 SOWAHBA6NEL2 793 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 CPLX1O14810 134 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 DTNBO60941 627 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 CFBP00751 764 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 IGHA2P01877 340 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 PRKAR2AP13861 404 aaKnown RBP18.65■□□□□ 0.58
SNRPB-202ENST00000438552 UBXN2AP68543 259 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 MTFR1Q15390 333 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 MCF2L2Q86YR7 1114 aa18.65■□□□□ 0.58
SNRPB-202ENST00000438552 DDX49Q9Y6V7 483 aaKnown RBP18.65■□□□□ 0.58
SNRPB-202ENST00000438552 CACNB2Q08289 660 aaPredicted RBP18.64■□□□□ 0.57
SNRPB-202ENST00000438552 MFSD14CQ5VZR4 134 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 RGS22Q8NE09 1264 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 RNF26Q9BY78 433 aaPredicted RBP18.64■□□□□ 0.57
SNRPB-202ENST00000438552 UNC93B1Q9H1C4 597 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 LIMCH1Q9UPQ0 1083 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 BRCA2P51587 3418 aa18.64■□□□□ 0.57
SNRPB-202ENST00000438552 STXBP3O00186 592 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 PRPF3O43395 683 aaKnown RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 ST18O60284 1047 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 CD2BP2O95400 341 aaKnown RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 CCL5P13501 91 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 SCG2P13521 617 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 HOXA13P31271 388 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 HSD17B4P51659 736 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 ST3GAL1Q11201 340 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 PKN1Q16512 942 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 MAP3K21Q5TCX8 1036 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 TYW1BQ6NUM6 668 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 CPLX2Q6PUV4 134 aaKnown RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 ZNF467Q7Z7K2 595 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 SYTL5Q8TDW5 730 aaPredicted RBP18.63■□□□□ 0.57
SNRPB-202ENST00000438552 TINF2Q9BSI4 451 aa18.63■□□□□ 0.57
SNRPB-202ENST00000438552 ALDH5A1P51649 535 aaPredicted RBP18.62■□□□□ 0.57
SNRPB-202ENST00000438552 NAPAP54920 295 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 AKAP17AQ02040 695 aaKnown RBP18.62■□□□□ 0.57
SNRPB-202ENST00000438552 GHRHRQ02643 423 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
SNRPB-202ENST00000438552 ARMCX2Q7L311 632 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 TRPV1Q8NER1 839 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 BARHL2Q9NY43 387 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
SNRPB-202ENST00000438552 SYNGAP1Q96PV0 1343 aa18.62■□□□□ 0.57
SNRPB-202ENST00000438552 CCDC85CA6NKD9 419 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 GCOM1H8Y6P7 765 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-202ENST00000438552 hCG_1984214I3L0E3 225 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 CDKL5O76039 1030 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 CTDNEP1O95476 244 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 POLR2MP0CAP2 368 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 CYBAP13498 195 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 CCND3P30281 292 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-202ENST00000438552 PRAMEF19Q5SWL8 479 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 PPP1R18Q6NYC8 613 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 MAMDC4Q6UXC1 1216 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 ZNF713Q8N859 430 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-202ENST00000438552 MAF1Q9H063 256 aa18.61■□□□□ 0.57
SNRPB-202ENST00000438552 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.61■□□□□ 0.57
SNRPB-202ENST00000438552 UBE2SQ16763 222 aa18.6■□□□□ 0.57
SNRPB-202ENST00000438552 CCDC83Q8IWF9 413 aa18.6■□□□□ 0.57
SNRPB-202ENST00000438552 MSL3Q8N5Y2 521 aaKnown RBP18.6■□□□□ 0.57
SNRPB-202ENST00000438552 TAAR1Q96RJ0 339 aa18.6■□□□□ 0.57
SNRPB-202ENST00000438552 RNF208Q9H0X6 261 aa18.6■□□□□ 0.57
SNRPB-202ENST00000438552 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.6■□□□□ 0.57
SNRPB-202ENST00000438552 ADD3Q9UEY8 706 aaKnown RBP18.6■□□□□ 0.57
SNRPB-202ENST00000438552 KIAA1217Q5T5P2 1943 aa18.6■□□□□ 0.57
SNRPB-202ENST00000438552 RPTORQ8N122 1335 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 STK36Q9NRP7 1315 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 ASB14A6NK59 587 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 SNAI1O95863 264 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-202ENST00000438552 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
SNRPB-202ENST00000438552 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 FCHSD1Q86WN1 690 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 NSUN7Q8NE18 718 aaKnown RBP18.59■□□□□ 0.57
SNRPB-202ENST00000438552 DNERQ8NFT8 737 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-202ENST00000438552 AIFM3Q96NN9 605 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 HMX1Q9NP08 348 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-202ENST00000438552 VPS54Q9P1Q0 977 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 CNPY2Q9Y2B0 182 aa18.59■□□□□ 0.57
SNRPB-202ENST00000438552 MEIS2O14770 477 aa18.58■□□□□ 0.56
SNRPB-202ENST00000438552 JAK2O60674 1132 aa18.58■□□□□ 0.56
SNRPB-202ENST00000438552 DEXIO95424 95 aa18.58■□□□□ 0.56
SNRPB-202ENST00000438552 CNGA1P29973 690 aa18.58■□□□□ 0.56
SNRPB-202ENST00000438552 ADCY7P51828 1080 aa18.58■□□□□ 0.56
SNRPB-202ENST00000438552 SOX10P56693 466 aa18.58■□□□□ 0.56
SNRPB-202ENST00000438552 FBXO16Q8IX29 292 aaPredicted RBP18.58■□□□□ 0.56
SNRPB-202ENST00000438552 SAMD3Q8N6K7 520 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms