RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 CYP2J2P51589 502 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 KCNK3O14649 394 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 EHHADHQ08426 723 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 MYOCDQ8IZQ8 938 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 PACSIN2Q9UNF0 486 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 N4BP1O75113 896 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 PABPC4Q13310 644 aaKnown RBP eCLIP12.91□□□□□ -0.343e-8■□□□□ 9.8
PDLIM5-206ENST00000437932 NR1I3Q14994 352 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 CFAP58Q5T655 872 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 RNF40O75150 1001 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 ALX1Q15699 326 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 NTRK3Q16288 839 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 BCS1LQ9Y276 419 aa12.91□□□□□ -0.34
PDLIM5-206ENST00000437932 OPA1O60313 960 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 STAT3P40763 770 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 VAV2P52735 878 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 KRT12Q99456 494 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 EPB41P11171 864 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 TNIP1Q15025 636 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 INTS5Q6P9B9 1019 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 KRT26Q7Z3Y9 468 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 ZNF579Q8NAF0 562 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 UHMK1Q8TAS1 419 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 TMEM60Q9H2L4 133 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 AGPAT5Q9NUQ2 364 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 THRAP3Q9Y2W1 955 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 NFAT5O94916 1531 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 TCP10L2B9ZVM9 353 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 NTSR2O95665 410 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 CEP95Q96GE4 821 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 SELENOOQ9BVL4 669 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
PDLIM5-206ENST00000437932 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 TADA3O75528 432 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 CASP8Q14790 479 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 TDP2O95551 362 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 ADAM9Q13443 819 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 MYO1AQ9UBC5 1043 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 PPP1R3GB7ZBB8 358 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 GYPCP04921 128 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 GPSM2P81274 684 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 AGXT2Q9BYV1 514 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 A0A1B0GTH6 734 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 GNGT1P63211 74 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 PNPLA7Q6ZV29 1317 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 GUCY2DQ02846 1103 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 DPH5Q9H2P9 285 aa12.89□□□□□ -0.35
PDLIM5-206ENST00000437932 XDHP47989 1333 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 PLCD4Q9BRC7 762 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 MST1RQ04912 1400 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 GSTTP1A0A1W2PQM5 241 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 HPSEQ9Y251 543 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L15C9J2P7 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L13C9JLJ4 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L11C9JVI0 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L18D6R9N7 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L22D6RA61 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L17D6RBQ6 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L19D6RCP7 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L20D6RJB6 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 NEFHP12036 1026 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 VSNL1P62760 191 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L24Q0WX57 530 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 TTC31Q49AM3 519 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L6PQ6QN14 398 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 E9PMD0 336 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 CETN3O15182 167 aa12.88□□□□□ -0.35
PDLIM5-206ENST00000437932 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms