RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TMEM265A0A087WTH1 108 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 MYADML2A6NDP7 307 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 ARVCFO00192 962 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 ORC4O43929 436 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 PLA2G6O60733 806 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 FOSL2P15408 326 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
VPS50-203ENST00000436177 GJA9P57773 515 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 CNTN2Q02246 1040 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 FAAP100Q0VG06 881 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 FSCN1Q16658 493 aaKnown RBP9.14□□□□□ -0.95
VPS50-203ENST00000436177 TLK2Q86UE8 772 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 KLHDC9Q8NEP7 349 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 CDX2Q99626 313 aaPredicted RBP9.14□□□□□ -0.95
VPS50-203ENST00000436177 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 UPF3AQ9H1J1 476 aaKnown RBP9.14□□□□□ -0.95
VPS50-203ENST00000436177 HELLSQ9NRZ9 838 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 PRR12Q9ULL5 1215 aa9.14□□□□□ -0.95
VPS50-203ENST00000436177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.14□□□□□ -0.95
VPS50-203ENST00000436177 RAD50Q92878 1312 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 PTPDC1A2A3K4 754 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 NMT2O60551 498 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 TIMP1P01033 207 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 ICAM1P05362 532 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 TOP1P11387 765 aaKnown RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 DNAJB2P25686 324 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 PDE1AP54750 535 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 SNAP25P60880 206 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 BRDTQ58F21 947 aaPredicted RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 SYDE2Q5VT97 1194 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 MFSD5Q6N075 450 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 PSRC1Q6PGN9 363 aaPredicted RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 CXCL17Q6UXB2 119 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 FAM133AQ8N9E0 248 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 MYLIPQ8WY64 445 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 WNT2BQ93097 391 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 ZDHHC16Q969W1 377 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 SEMA6BQ9H3T3 888 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 RNF41Q9H4P4 317 aaPredicted RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 ANAPC4Q9UJX5 808 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 TBX21Q9UL17 535 aa9.13□□□□□ -0.95
VPS50-203ENST00000436177 GREB1LQ9C091 1923 aaPredicted RBP9.13□□□□□ -0.95
VPS50-203ENST00000436177 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 B4DLN1 442 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 DYNC1LI2O43237 492 aaPredicted RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 GTPBP6O43824 516 aaPredicted RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 PCP11498 1178 aaKnown RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 ITGB8P26012 769 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 SLC16A2P36021 539 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 MRPL12P52815 198 aaKnown RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 EPHB4P54760 987 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 BEX3Q00994 111 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 HDAC1Q13547 482 aaPredicted RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 ALX1Q15699 326 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 MCMDC2Q4G0Z9 681 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 VPS53Q5VIR6 699 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 IQSEC1Q6DN90 963 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 CCSAPQ6IQ19 270 aaPredicted RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 MFSD6Q6ZSS7 791 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 TICAM2Q86XR7 235 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 FBXO16Q8IX29 292 aaPredicted RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 RILPL2Q969X0 211 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 DDX27Q96GQ7 796 aaKnown RBP9.12□□□□□ -0.95
VPS50-203ENST00000436177 FGD4Q96M96 766 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 CRBNQ96SW2 442 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 SEZ6LQ9BYH1 1024 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 HIPK3Q9H422 1215 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 VTA1Q9NP79 307 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 DIAPH3Q9NSV4 1193 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 CYP39A1Q9NYL5 469 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 PARP14Q460N5 1801 aa9.12□□□□□ -0.95
VPS50-203ENST00000436177 ZNF536O15090 1300 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 FRMPD2Q68DX3 1309 aaPredicted RBP9.11□□□□□ -0.95
VPS50-203ENST00000436177 CCDC171Q6TFL3 1326 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 A0A0D9SFI3 127 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
VPS50-203ENST00000436177 ADCY6O43306 1168 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 CSF2RAP15509 400 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 CALML3P27482 149 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 HAND2P61296 217 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 PDE4DQ08499 809 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 ITGA7Q13683 1181 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 AAMPQ13685 434 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 MUM1L1Q5H9M0 696 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 RASGRP2Q7LDG7 609 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 ESR2Q92731 530 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 TIFAQ96CG3 184 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 FAM227BQ96M60 508 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms