RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 REPS2Q8NFH8 660 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 FSD1Q9BTV5 496 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 TEX13BQ9BXU2 312 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 KATNBL1Q9H079 304 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 IL1RAPL2Q9NP60 686 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 CLDND1Q9NY35 253 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
CPNE1-214ENST00000435747 TMX2Q9Y320 296 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 MAP1BP46821 2468 aaKnown RBP12.51□□□□□ -0.41
CPNE1-214ENST00000435747 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 MED19A0JLT2 244 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-214ENST00000435747 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 GJB5O95377 273 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 ICA1Q05084 483 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 HSP90AB4PQ58FF6 505 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 TCEAL5Q5H9L2 206 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-214ENST00000435747 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 MIGA1Q8NAN2 632 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE1-214ENST00000435747 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
CPNE1-214ENST00000435747 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 AVPR2P30518 371 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 DEFB103AP81534 67 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 ZXDAP98168 799 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 GABPAQ06546 454 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 BFSP2Q13515 415 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 FGD4Q96M96 766 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
CPNE1-214ENST00000435747 C17orf80Q9BSJ5 609 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 RIPK3Q9Y572 518 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
CPNE1-214ENST00000435747 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 STXBP3O00186 592 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 KDM4AO75164 1064 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 HMMRO75330 724 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 RGS20O76081 388 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 PTGS1P23219 599 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 COL19A1Q14993 1142 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 CLUL1Q15846 466 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 RPAINQ86UA6 219 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 SIAH1Q8IUQ4 282 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 NSUN3Q9H649 340 aaKnown RBP12.49□□□□□ -0.41
CPNE1-214ENST00000435747 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
CPNE1-214ENST00000435747 MBTPS2O43462 519 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 NCK2O43639 380 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 RAD21O60216 631 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 RAB11FIP3O75154 756 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
CPNE1-214ENST00000435747 SMPD1P17405 629 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 NUBP1P53384 320 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 SIGLEC14Q08ET2 396 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 DGLUCYQ7Z3D6 616 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 CLASRPQ8N2M8 674 aaKnown RBP12.48□□□□□ -0.41
CPNE1-214ENST00000435747 CNTNAP3BQ96NU0 1288 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 CNTNAP3Q9BZ76 1288 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 Q9Y3F1 56 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 MICAL3Q7RTP6 2002 aa12.48□□□□□ -0.41
CPNE1-214ENST00000435747 NBL1P41271 181 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 SMAD4Q13485 552 aaKnown RBP12.47□□□□□ -0.41
CPNE1-214ENST00000435747 LRRFIP1Q32MZ4 808 aaKnown RBP12.47□□□□□ -0.41
CPNE1-214ENST00000435747 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 ADSSL1Q8N142 457 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 NKD2Q969F2 451 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-214ENST00000435747 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
CPNE1-214ENST00000435747 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 NOD1Q9Y239 953 aa12.47□□□□□ -0.41
CPNE1-214ENST00000435747 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-214ENST00000435747 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-214ENST00000435747 AKR1B1P15121 316 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 PDE6AP16499 860 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 ATP5JP18859 108 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 LTBRP36941 435 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 GPM6BQ13491 265 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPNE1-214ENST00000435747 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 SAMD11Q96NU1 681 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-214ENST00000435747 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 INSL6Q9Y581 213 aa12.46□□□□□ -0.41
CPNE1-214ENST00000435747 ANKRD11Q6UB99 2663 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-214ENST00000435747 MYH7P12883 1935 aa12.46□□□□□ -0.42
CPNE1-214ENST00000435747 NLRC5Q86WI3 1866 aa12.46□□□□□ -0.42
CPNE1-214ENST00000435747 ATG2AQ2TAZ0 1938 aa12.45□□□□□ -0.42
CPNE1-214ENST00000435747 ABHD14A-ACY1A0A1B0GW23 586 aa12.45□□□□□ -0.42
CPNE1-214ENST00000435747 ASB14A6NK59 587 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms