RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MX2P20592 715 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 INPP5BP32019 993 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 MUM1Q2TAK8 710 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 POLA2Q14181 598 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 CCDC138Q96M89 665 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 XAB2Q9HCS7 855 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 ZNF148Q9UQR1 794 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 MFAP3P55082 362 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 GCKRQ14397 625 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 LRRC43Q8N309 656 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 PPM1KQ8N3J5 372 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 SORBS3O60504 671 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 SLC12A1Q13621 1099 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 RFX6Q8HWS3 928 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 POLKQ9UBT6 870 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 TLK1Q9UKI8 766 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 NESP48681 1621 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 HGSO14964 777 aaPredicted RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 SYF2O95926 243 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 HOXB7P09629 217 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 BZW1Q7L1Q6 419 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 COA7Q96BR5 231 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 SRPK1Q96SB4 655 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 RAB42Q8N4Z0 105 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 NPATQ14207 1427 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 HNRNPDLO14979 420 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 ABCB4P21439 1286 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 TRIM58Q8NG06 486 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 ENOX1Q8TC92 643 aaKnown RBP12.18□□□□□ -0.46
SCN4A-201ENST00000435607 MGARPQ8TDB4 240 aa12.18□□□□□ -0.46
SCN4A-201ENST00000435607 OPHN1O60890 802 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 PRKCQQ04759 706 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 CCNYQ8ND76 341 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 NR1H4Q96RI1 486 aaPredicted RBP12.17□□□□□ -0.46
SCN4A-201ENST00000435607 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 PAMP19021 973 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 ZHX1Q9UKY1 873 aaPredicted RBP12.17□□□□□ -0.46
SCN4A-201ENST00000435607 MCF2LO15068 1137 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 KAZNQ674X7 775 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 SNX19Q92543 992 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 MTRQ99707 1265 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 APOEP02649 317 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 DRP2Q13474 957 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 DSTYKQ6XUX3 929 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 KRIT1O00522 736 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 CPP00450 1065 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 HSPA6P17066 643 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 CA4P22748 312 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 HOXC9P31274 260 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 SERPINB6P35237 376 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 TSC1Q92574 1164 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 ANKRD42Q8N9B4 389 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 GIPC2Q8TF65 315 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 ESRRBO95718 433 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 CTDSPL2Q05D32 466 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 NT5C1BQ96P26 610 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 DYRK4Q9NR20 520 aa12.17□□□□□ -0.46
SCN4A-201ENST00000435607 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SGK1O00141 431 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 NLRP12P59046 1061 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 BANK1Q8NDB2 785 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SNX21Q969T3 373 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 CCDC51Q96ER9 411 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 YWHAGP61981 247 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SCHIP1Q9P0W5 487 aaPredicted RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 BAG2O95816 211 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 MYCP01106 439 aaPredicted RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 GLE1Q53GS7 698 aaKnown RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 FAM196AQ6ZSG2 479 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 FRA10AC1Q70Z53 315 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 TEKT4Q8WW24 435 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 NRBF2Q96F24 287 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 TNNQ9UQP3 1299 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 CCDC127Q96BQ5 260 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 UIMC1Q96RL1 719 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SLC52A2Q9HAB3 445 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 MYO1FO00160 1098 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms