RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MMRN2Q9H8L6 949 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 LRRC10BA6NIK2 292 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 LGALS16A8MUM7 142 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 NKRFO15226 690 aaKnown RBP eCLIP8.23□□□□□ -1.096e-9■□□□□ 11.2
CPSF6-202ENST00000435070 CFAP221Q4G0U5 840 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 RWDD2AQ9UIY3 292 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 TDRD12Q587J7 1177 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 UHMK1Q8TAS1 419 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 PDHA1P08559 390 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 VIMP08670 466 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 PECAM1P16284 738 aaPredicted RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 RPS6KA3P51812 740 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 EHHADHQ08426 723 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 RTN1Q16799 776 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 CCDC178Q5BJE1 867 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 KIF6Q6ZMV9 814 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 CCT6BQ92526 530 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 TUBGCP2Q9BSJ2 902 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 METTL22Q9BUU2 404 aaPredicted RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 CCDC113Q9H0I3 377 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 TMBIM4Q9HC24 238 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 USP6P35125 1406 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 GNAT1P11488 350 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 HSD17B3P37058 310 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 NBPF9Q3BBW0 867 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 CCDC197Q8NCU1 140 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 TLR10Q9BXR5 811 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 BATF3Q9NR55 127 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 CCT8L1PA6NM43 557 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RANBP1P43487 201 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 ARID5AQ03989 594 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 SLC30A9Q6PML9 568 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 MTMR8Q96EF0 704 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 MTRQ99707 1265 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 CEP126Q9P2H0 1117 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RFX7Q2KHR2 1363 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RNMTO43148 476 aaKnown RBP8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RAD51CO43502 376 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 PPP2R2AP63151 447 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 USP4Q13107 963 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 PTGDRQ13258 359 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 TAX1BP1Q86VP1 789 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 ERICH1Q86X53 443 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 GOLPH3Q9H4A6 298 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 ZSWIM5Q9P217 1185 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 KIF11P52732 1056 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 CSGALNACT2Q8N6G5 542 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 TAF1DQ9H5J8 278 aaPredicted RBP8.22□□□□□ -1.09
CPSF6-202ENST00000435070 SH2D4AQ9H788 454 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 LRRC4CQ9HCJ2 640 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RPN1P04843 607 aaKnown RBP8.22□□□□□ -1.09
CPSF6-202ENST00000435070 MCM7P33993 719 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 ATG9AQ7Z3C6 839 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 APPBP2Q92624 585 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.22□□□□□ -1.09
CPSF6-202ENST00000435070 MYH13Q9UKX3 1938 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RAB27AP51159 221 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 PDIA6Q15084 440 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RRAGAQ7L523 313 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
CPSF6-202ENST00000435070 MAGEC3Q8TD91 643 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 RAPGEF4Q8WZA2 1011 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 TSC22D3Q99576 134 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 PIDD1Q9HB75 910 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 SLC12A6Q9UHW9 1150 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 LAMA4Q16363 1823 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 UTYO14607 1347 aa8.22□□□□□ -1.09
CPSF6-202ENST00000435070 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 CTCFP49711 727 aaPredicted RBP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 GFPT1Q06210 699 aaPredicted RBP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 TAF11Q15544 211 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 ELOA2Q8IYF1 753 aaPredicted RBP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 OSBPL1AQ9BXW6 950 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 LY9Q9HBG7 655 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 EXOC1Q9NV70 894 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 AATFQ9NY61 560 aaKnown RBP eCLIP8.21□□□□□ -1.095e-19■■■■■ 27.9
CPSF6-202ENST00000435070 FBXL5Q9UKA1 691 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 KDM6AO15550 1401 aaPredicted RBP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 CPDO75976 1380 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 CEMIPQ8WUJ3 1361 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 F8W031 263 aaPredicted RBP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 FLT3P36888 993 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 ZBED6P86452 979 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 ZNF844Q08AG5 666 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 TCIRG1Q13488 830 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 IGDCC4Q8TDY8 1250 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 WASF1Q92558 559 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 BORCS6Q96GS4 357 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 NOC4LQ9BVI4 516 aaKnown RBP8.21□□□□□ -1.09
CPSF6-202ENST00000435070 AP1M1Q9BXS5 423 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 ARHGAP20Q9P2F6 1191 aa8.21□□□□□ -1.09
CPSF6-202ENST00000435070 PNMA2Q9UL42 364 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms