RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 C1orf159Q96HA4 380 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 AARSD1Q9BTE6 412 aaKnown RBP5.26□□□□□ -1.57
LINC01239-201ENST00000433645 NSUN3Q9H649 340 aaKnown RBP5.26□□□□□ -1.57
LINC01239-201ENST00000433645 DCP1AQ9NPI6 582 aaPredicted RBP5.26□□□□□ -1.57
LINC01239-201ENST00000433645 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.26□□□□□ -1.57
LINC01239-201ENST00000433645 NPFFR2Q9Y5X5 522 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 TBX1O43435 398 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 CYBBP04839 570 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 SNRPB2P08579 225 aaKnown RBP5.25□□□□□ -1.57
LINC01239-201ENST00000433645 PDE6BP35913 854 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 NFE2L2Q16236 605 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 PAQR3Q6TCH7 311 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 RSPO2Q6UXX9 243 aaPredicted RBP5.25□□□□□ -1.57
LINC01239-201ENST00000433645 DPH6Q7L8W6 267 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 DEPDC7Q96QD5 511 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 SLC38A3Q99624 504 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 SPATA9Q9BWV2 254 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 CLEC1BQ9P126 229 aa5.25□□□□□ -1.57
LINC01239-201ENST00000433645 TRAV20A0A0B4J274 112 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 TEX51A0A1B0GUA7 166 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 C7orf72A4D263 438 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 MEFVO15553 781 aaPredicted RBP5.24□□□□□ -1.57
LINC01239-201ENST00000433645 MED14OSP0DP75 135 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 GLDCP23378 1020 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 LTBRP36941 435 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 IFRD2Q12894 506 aaPredicted RBP5.24□□□□□ -1.57
LINC01239-201ENST00000433645 MTERF2Q49AM1 385 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 ADGRF1Q5T601 910 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 Q8N1Y9 231 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 LZTR1Q8N653 840 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 JMYQ8N9B5 988 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 TMEM145Q8NBT3 493 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 NETO2Q8NC67 525 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 DIO2Q92813 273 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 MTA3Q9BTC8 594 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 OSBPL2Q9H1P3 480 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 ARHGEF4Q9NR80 690 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 SNTG2Q9NY99 539 aa5.24□□□□□ -1.57
LINC01239-201ENST00000433645 A0A1W2PQJ5 194 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 ADCY3O60266 1144 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 TSPAN15O95858 294 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 DBHP09172 617 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 MSL3P1P0C860 447 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 GLI4P10075 376 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 MAPKAPK2P49137 400 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 CABP7Q86V35 215 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 SIRT2Q8IXJ6 389 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 ZBTB38Q8NAP3 1195 aaPredicted RBP5.23□□□□□ -1.57
LINC01239-201ENST00000433645 DIRC2Q96SL1 478 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 ZFYVE21Q9BQ24 234 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 IER2Q9BTL4 223 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 LGR4Q9BXB1 951 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 GPR27Q9NS67 375 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 KLHL14Q9P2G3 628 aa5.23□□□□□ -1.57
LINC01239-201ENST00000433645 CCDC163A0A0D9SF12 145 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 MYO1BO43795 1136 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 DLX3O60479 287 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 PABPC1P11940 636 aaKnown RBP5.22□□□□□ -1.57
LINC01239-201ENST00000433645 ECI1P42126 302 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 GRIA2P42262 883 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 KCNJ6P48051 423 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 RPL11P62913 178 aaKnown RBP5.22□□□□□ -1.57
LINC01239-201ENST00000433645 SSRP1Q08945 709 aaKnown RBP5.22□□□□□ -1.57
LINC01239-201ENST00000433645 SLC9A5Q14940 896 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 KIR3DS1Q14943 382 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 SF1Q15637 639 aaKnown RBP5.22□□□□□ -1.57
LINC01239-201ENST00000433645 BICRALQ6AI39 1079 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 NSMFQ6X4W1 530 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 SPATC1Q76KD6 591 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 RIOX2Q8IUF8 465 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 SCUBE1Q8IWY4 988 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 PPIL6Q8IXY8 311 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 DCAF4Q8WV16 495 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 OSBP2Q969R2 916 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 SRPK1Q96SB4 655 aaKnown RBP5.22□□□□□ -1.57
LINC01239-201ENST00000433645 MCOLN1Q9GZU1 580 aa5.22□□□□□ -1.57
LINC01239-201ENST00000433645 TIMM13Q9Y5L4 95 aaPredicted RBP5.22□□□□□ -1.57
LINC01239-201ENST00000433645 MYOCOSA0A1B0GUC4 107 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 H7BY64 318 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 ARNTLO00327 626 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 PPP1R11O60927 126 aaPredicted RBP5.21□□□□□ -1.58
LINC01239-201ENST00000433645 ZBTB7AO95365 584 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 GALK1P51570 392 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 RAB3GAP1Q15042 981 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 PKN1Q16512 942 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 INF2Q27J81 1249 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 MROH9Q5TGP6 573 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 MBLAC2Q68D91 279 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 DENND5AQ6IQ26 1287 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 RPTNQ6XPR3 784 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 SYDE1Q6ZW31 735 aaPredicted RBP5.21□□□□□ -1.58
LINC01239-201ENST00000433645 ZNF605Q86T29 641 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 CCDC103Q8IW40 242 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 PLEKHO2Q8TD55 490 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 DPF3Q92784 378 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 DNAJC2Q99543 621 aaKnown RBP5.21□□□□□ -1.58
LINC01239-201ENST00000433645 GOLGA2P5Q9HBQ8 144 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 NUDT5Q9UKK9 219 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms