RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 GPKOWQ92917 476 aaPredicted RBP eCLIP17.91■□□□□ 0.46
TREX1-201ENST00000433541 CUL5Q93034 780 aa17.91■□□□□ 0.46
TREX1-201ENST00000433541 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
TREX1-201ENST00000433541 ZHX1Q9UKY1 873 aaPredicted RBP17.91■□□□□ 0.46
TREX1-201ENST00000433541 ASB14A6NK59 587 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 B4DLN1 442 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 CCND3P30281 292 aaPredicted RBP17.9■□□□□ 0.46
TREX1-201ENST00000433541 MRPL12P52815 198 aaKnown RBP17.9■□□□□ 0.46
TREX1-201ENST00000433541 NAPAP54920 295 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 PRAMEF19Q5SWL8 479 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 ARMCX2Q7L311 632 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
TREX1-201ENST00000433541 FAM133AQ8N9E0 248 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 PHKBQ93100 1093 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 DEFB118Q96PH6 123 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 PURBQ96QR8 312 aaKnown RBP17.9■□□□□ 0.46
TREX1-201ENST00000433541 BACH2Q9BYV9 841 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 FRMPD3Q5JV73 1810 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 NID2Q14112 1375 aa17.9■□□□□ 0.46
TREX1-201ENST00000433541 SOWAHBA6NEL2 793 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 GCOM1H8Y6P7 765 aaPredicted RBP17.89■□□□□ 0.45
TREX1-201ENST00000433541 POLR2MP0CAP2 368 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 HOXA13P31271 388 aaPredicted RBP17.89■□□□□ 0.45
TREX1-201ENST00000433541 EVCP57679 992 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 RABEP1Q15276 862 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 FCHSD1Q86WN1 690 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 MSL3Q8N5Y2 521 aaKnown RBP17.89■□□□□ 0.45
TREX1-201ENST00000433541 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 TBC1D5Q92609 795 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 IL17RAQ96F46 866 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 ALDH8A1Q9H2A2 487 aaPredicted RBP17.89■□□□□ 0.45
TREX1-201ENST00000433541 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
TREX1-201ENST00000433541 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
TREX1-201ENST00000433541 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 SYNGAP1Q96PV0 1343 aa17.89■□□□□ 0.45
TREX1-201ENST00000433541 ST18O60284 1047 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 CDKL5O76039 1030 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 TFRCP02786 760 aaKnown RBP17.88■□□□□ 0.45
TREX1-201ENST00000433541 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
TREX1-201ENST00000433541 ALDH5A1P51649 535 aaPredicted RBP17.88■□□□□ 0.45
TREX1-201ENST00000433541 PDE4DQ08499 809 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 SSRP1Q08945 709 aaKnown RBP17.88■□□□□ 0.45
TREX1-201ENST00000433541 ARHGEF16Q5VV41 709 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 EEPD1Q7L9B9 569 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 TBC1D32Q96NH3 1257 aa17.88■□□□□ 0.45
TREX1-201ENST00000433541 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.88■□□□□ 0.45
TREX1-201ENST00000433541 POTEFA5A3E0 1075 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 GJB1P08034 283 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 CYBAP13498 195 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 MAP3K21Q5TCX8 1036 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 WWC2Q6AWC2 1192 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 DNERQ8NFT8 737 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 SYTL5Q8TDW5 730 aaPredicted RBP17.87■□□□□ 0.45
TREX1-201ENST00000433541 RMDN3Q96TC7 470 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 PSTPIP2Q9H939 334 aa17.87■□□□□ 0.45
TREX1-201ENST00000433541 LRRC37A2A6NM11 1700 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 hCG_1984214I3L0E3 225 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 SCG2P13521 617 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 IFNAR1P17181 557 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 EIF2AK2P19525 551 aaKnown RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 FUT2Q10981 343 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 SCRN1Q12765 414 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 ANO1Q5XXA6 986 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 MAMDC4Q6UXC1 1216 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 SAMD3Q8N6K7 520 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 ZNF713Q8N859 430 aaPredicted RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 NECAB1Q8N987 351 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 NSUN6Q8TEA1 469 aaKnown RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 CCDC12Q8WUD4 166 aaPredicted RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 FGD4Q96M96 766 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 TAAR1Q96RJ0 339 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 RNF26Q9BY78 433 aaPredicted RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 MAF1Q9H063 256 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 ABHD16BQ9H3Z7 469 aa17.86■□□□□ 0.45
TREX1-201ENST00000433541 MAP3K20Q9NYL2 800 aaKnown RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
TREX1-201ENST00000433541 OPLAHO14841 1288 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 PRPF3O43395 683 aaKnown RBP17.85■□□□□ 0.45
TREX1-201ENST00000433541 MSCO60682 206 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 PFKFB2O60825 505 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 EN2P19622 333 aaPredicted RBP17.85■□□□□ 0.45
TREX1-201ENST00000433541 HSD17B4P51659 736 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 ADCY7P51828 1080 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 ACVR2BQ13705 512 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 PFKFB3Q16875 520 aaPredicted RBP17.85■□□□□ 0.45
TREX1-201ENST00000433541 FBXO16Q8IX29 292 aaPredicted RBP17.85■□□□□ 0.45
TREX1-201ENST00000433541 TRPV1Q8NER1 839 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 KIF2CQ99661 725 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 PAK6Q9NQU5 681 aaPredicted RBP17.85■□□□□ 0.45
TREX1-201ENST00000433541 DDX20Q9UHI6 824 aaKnown RBP17.85■□□□□ 0.45
TREX1-201ENST00000433541 NRBP1Q9UHY1 535 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 LIMCH1Q9UPQ0 1083 aa17.85■□□□□ 0.45
TREX1-201ENST00000433541 KIAA1217Q5T5P2 1943 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 ASTN1O14525 1302 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 STXBP3O00186 592 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 SEPT4O43236 478 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 LARGE1O95461 756 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 SGPL1O95470 568 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms