RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PLEKHN1Q494U1 663 aaPredicted RBP5.4□□□□□ -1.54
CLK1-204ENST00000432425 GTF2IRD2BQ6EKJ0 949 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 GTF2IRD2Q86UP8 949 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 CABP7Q86V35 215 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 NLGN2Q8NFZ4 835 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 HNRNPLLQ8WVV9 542 aaKnown RBP5.4□□□□□ -1.54
CLK1-204ENST00000432425 GMLQ99445 158 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 CNTD2Q9H8S5 307 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 CYBBP04839 570 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 DBHP09172 617 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 MAPKAPK2P49137 400 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 ZC3H6P61129 1189 aaKnown RBP5.4□□□□□ -1.55
CLK1-204ENST00000432425 CBX2Q14781 532 aaPredicted RBP5.4□□□□□ -1.55
CLK1-204ENST00000432425 ZNF385BQ569K4 471 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 ZC3H14Q6PJT7 736 aaKnown RBP5.4□□□□□ -1.55
CLK1-204ENST00000432425 PAQR3Q6TCH7 311 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 ANKS3Q6ZW76 656 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 LZTR1Q8N653 840 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 MRGPRX3Q96LB0 322 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 SIGLEC10Q96LC7 697 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 CLEC1BQ9P126 229 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 DBR1Q9UK59 544 aaKnown RBP5.4□□□□□ -1.55
CLK1-204ENST00000432425 IRAK3Q9Y616 596 aa5.4□□□□□ -1.55
CLK1-204ENST00000432425 NPHS1O60500 1241 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 GJB6O95452 261 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 CDR1P51861 262 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 EPHB3P54753 998 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 EEPD1Q7L9B9 569 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 C1QL4Q86Z23 238 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 LGR4Q9BXB1 951 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 NKX2-4Q9H2Z4 354 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 CYP26B1Q9NR63 512 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 RWDD3Q9Y3V2 267 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 KCTD3Q9Y597 815 aa5.39□□□□□ -1.55
CLK1-204ENST00000432425 AGRPO00253 132 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 N4BP3O15049 544 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 ITGAVP06756 1048 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 THBDP07204 575 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 ZSCAN22P10073 491 aaPredicted RBP5.38□□□□□ -1.55
CLK1-204ENST00000432425 PLS3P13797 630 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 MRM1Q6IN84 353 aaKnown RBP5.38□□□□□ -1.55
CLK1-204ENST00000432425 ZNF227Q86WZ6 799 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 MICAL1Q8TDZ2 1067 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 USP33Q8TEY7 942 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 MZB1Q8WU39 189 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 BTN2A2Q8WVV5 523 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 COPS5Q92905 334 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 IRF2BPLQ9H1B7 796 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 EPN3Q9H201 632 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 GPRC5CQ9NQ84 441 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 GULP1Q9UBP9 304 aa5.38□□□□□ -1.55
CLK1-204ENST00000432425 F8W031 263 aaPredicted RBP5.37□□□□□ -1.55
CLK1-204ENST00000432425 SNRPB2P08579 225 aaKnown RBP5.37□□□□□ -1.55
CLK1-204ENST00000432425 PI3P19957 117 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 ZNF200P98182 395 aaPredicted RBP5.37□□□□□ -1.55
CLK1-204ENST00000432425 NAALADL2Q58DX5 795 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 LDHDQ86WU2 507 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 MMP19Q99542 508 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 ST7Q9NRC1 585 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
CLK1-204ENST00000432425 C7orf72A4D263 438 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 TBX1O43435 398 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 STK10O94804 968 aaKnown RBP5.37□□□□□ -1.55
CLK1-204ENST00000432425 PFKLP17858 780 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 HOXC12P31275 282 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 ECI1P42126 302 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 SSPNQ14714 243 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 SPOCD1Q6ZMY3 1216 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 SIAH1Q8IUQ4 282 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 TMEM151BQ8IW70 566 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 NUDT5Q9UKK9 219 aa5.37□□□□□ -1.55
CLK1-204ENST00000432425 GLI4P10075 376 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 KCNJ6P48051 423 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 DDR2Q16832 855 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 IQCEQ6IPM2 695 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 FRS2Q8WU20 508 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 CCDC140Q96MF4 163 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 TRIM55Q9BYV6 548 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLK1-204ENST00000432425 PCDHA5Q9Y5H7 936 aa5.36□□□□□ -1.55
CLK1-204ENST00000432425 IRS4O14654 1257 aaPredicted RBP5.35□□□□□ -1.55
CLK1-204ENST00000432425 MEFVO15553 781 aaPredicted RBP5.35□□□□□ -1.55
CLK1-204ENST00000432425 KLF4O43474 513 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 BUB1BO60566 1050 aaPredicted RBP5.35□□□□□ -1.55
CLK1-204ENST00000432425 CPP00450 1065 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 FUCA1P04066 466 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 NCKAP1LP55160 1127 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 PRR5P85299 388 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 TARBP2Q15633 366 aaKnown RBP5.35□□□□□ -1.55
CLK1-204ENST00000432425 SLC10A6Q3KNW5 377 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 TCERG1LQ5VWI1 586 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 E4F1Q66K89 784 aaPredicted RBP5.35□□□□□ -1.55
CLK1-204ENST00000432425 MBLAC2Q68D91 279 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 WWC2Q6AWC2 1192 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 LCNL1Q6ZST4 164 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 AMIGO3Q86WK7 504 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 IGDCC3Q8IVU1 814 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 CELF2-AS1Q8N7Q2 184 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 NETO2Q8NC67 525 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms