RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 NONOQ15233 471 aaKnown RBP eCLIP20.81■□□□□ 0.92
HMGN1-206ENST00000431390 PTPAQ15257 358 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
HMGN1-206ENST00000431390 ADAMTS5Q9UNA0 930 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 MRPL11Q9Y3B7 192 aaKnown RBP20.81■□□□□ 0.92
HMGN1-206ENST00000431390 SMCHD1A6NHR9 2005 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
HMGN1-206ENST00000431390 ZNF536O15090 1300 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 MANSC4A6NHS7 340 aaPredicted RBP20.8■□□□□ 0.92
HMGN1-206ENST00000431390 ZBED4O75132 1171 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 PPP6R2O75170 966 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 TTC38Q5R3I4 469 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 IFNL1Q8IU54 200 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.8■□□□□ 0.92
HMGN1-206ENST00000431390 HOXC10Q9NYD6 342 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 BIN2Q9UBW5 565 aaPredicted RBP20.8■□□□□ 0.92
HMGN1-206ENST00000431390 TRIM17Q9Y577 477 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 PCDHB6Q9Y5E3 794 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 VWA5AO00534 786 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 HOXA7P31268 230 aaPredicted RBP20.8■□□□□ 0.92
HMGN1-206ENST00000431390 WNK4Q96J92 1243 aa20.8■□□□□ 0.92
HMGN1-206ENST00000431390 CTDP1Q9Y5B0 961 aaPredicted RBP20.8■□□□□ 0.92
HMGN1-206ENST00000431390 GOLGA6L4A6NEF3 574 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 IGF2BP3O00425 579 aaKnown RBP eCLIP20.79■□□□□ 0.92
HMGN1-206ENST00000431390 OAZ1P54368 228 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 AP3B2Q13367 1082 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 JAKMIP3Q5VZ66 844 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 GADL1Q6ZQY3 521 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 FASTKD5Q7L8L6 764 aaKnown RBP20.79■□□□□ 0.92
HMGN1-206ENST00000431390 GPT2Q8TD30 523 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 ATG4CQ96DT6 458 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 PGBD1Q96JS3 809 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 CCPG1Q9ULG6 757 aa20.79■□□□□ 0.92
HMGN1-206ENST00000431390 A0A0G2JMZ2 1700 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 PIK3CDO00329 1044 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 MEIS2O14770 477 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 OPLAHO14841 1288 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 ZBTB48P10074 688 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-206ENST00000431390 ATP2B1P20020 1258 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 GJA5P36382 358 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 ME1P48163 572 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 SNAPC2Q13487 334 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 UBE2SQ16763 222 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 INF2Q27J81 1249 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 TREML2Q5T2D2 321 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 OTOP1Q7RTM1 612 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 TMEM260Q9NX78 707 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 HTTP42858 3142 aa20.78■□□□□ 0.92
HMGN1-206ENST00000431390 FOSP01100 380 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-206ENST00000431390 INHBEP58166 350 aa20.77■□□□□ 0.92
HMGN1-206ENST00000431390 ADALQ6DHV7 355 aa20.77■□□□□ 0.92
HMGN1-206ENST00000431390 REPS2Q8NFH8 660 aa20.77■□□□□ 0.92
HMGN1-206ENST00000431390 AGBL1Q96MI9 1066 aa20.77■□□□□ 0.92
HMGN1-206ENST00000431390 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
HMGN1-206ENST00000431390 AGTPBP1Q9UPW5 1226 aa20.77■□□□□ 0.92
HMGN1-206ENST00000431390 SPDYE16A6NNV3 312 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-206ENST00000431390 ATP2A1O14983 1001 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 ORC2Q13416 577 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-206ENST00000431390 MOGSQ13724 837 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 USP17L6PQ6QN14 398 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 NEK8Q86SG6 692 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 TBCKQ8TEA7 893 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 RAVER2Q9HCJ3 691 aaKnown RBP20.76■□□□□ 0.91
HMGN1-206ENST00000431390 POTEFA5A3E0 1075 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 WNT7AO00755 349 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-206ENST00000431390 PABPC4Q13310 644 aaKnown RBP eCLIP20.76■□□□□ 0.914e-10■□□□□ 10.7
HMGN1-206ENST00000431390 SAMD3Q8N6K7 520 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 MYH7BA7E2Y1 1941 aa20.76■□□□□ 0.91
HMGN1-206ENST00000431390 A0A1W2PQ27 194 aa20.75■□□□□ 0.91
HMGN1-206ENST00000431390 A0A1W2PQ64 194 aa20.75■□□□□ 0.91
HMGN1-206ENST00000431390 A0A1W2PQD8 194 aa20.75■□□□□ 0.91
HMGN1-206ENST00000431390 GHRHRQ02643 423 aa20.75■□□□□ 0.91
HMGN1-206ENST00000431390 ZNF174Q15697 407 aa20.75■□□□□ 0.91
HMGN1-206ENST00000431390 CPXCR1Q8N123 301 aa20.75■□□□□ 0.91
HMGN1-206ENST00000431390 GCOM1H8Y6P7 765 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 POLR2MP0CAP2 368 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 MARCKSP29966 332 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 GTF2A2P52657 109 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 ATP2C1P98194 919 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 AXDND1Q5T1B0 1012 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 LBX2Q6XYB7 198 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 MCF2L2Q86YR7 1114 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 KRI1Q8N9T8 703 aaKnown RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 CD99L2Q8TCZ2 262 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 NAP1L4Q99733 375 aaKnown RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 ANO3Q9BYT9 981 aa20.74■□□□□ 0.91
HMGN1-206ENST00000431390 ZNF214Q9UL59 606 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-206ENST00000431390 CENPFP49454 3210 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 SPDYE3A6NKU9 549 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 CUTAO60888 179 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 ALAS1P13196 640 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 PTPREP23469 700 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 IRX3P78415 501 aaPredicted RBP20.73■□□□□ 0.91
HMGN1-206ENST00000431390 TKFCQ3LXA3 575 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 CLEC4DQ8WXI8 215 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 ANP32EQ9BTT0 268 aa20.73■□□□□ 0.91
HMGN1-206ENST00000431390 MAP3K20Q9NYL2 800 aaKnown RBP20.73■□□□□ 0.91
HMGN1-206ENST00000431390 SRPRBQ9Y5M8 271 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms