RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 CDH23Q9H251 3354 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 EYSQ5T1H1 3165 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 B4GALT4O60513 344 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 CCL23P55773 120 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 ZNF543Q08ER8 600 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 WDR11Q9BZH6 1224 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 CPVLQ9H3G5 476 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 ZNF576Q9H609 170 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
SEC13-211ENST00000431352 MYL3P08590 195 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 USH1GQ495M9 461 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 RNF207Q6ZRF8 634 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 MORC4Q8TE76 937 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 CLEC4DQ8WXI8 215 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 PBX4Q9BYU1 374 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 IL23AQ9NPF7 189 aa16.34■□□□□ 0.21
SEC13-211ENST00000431352 SDSP20132 328 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 PDE4DQ08499 809 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 DUSP28Q4G0W2 176 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.2
SEC13-211ENST00000431352 OTOP2Q7RTS6 562 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 ESR2Q92731 530 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 NOC4LQ9BVI4 516 aaKnown RBP16.33■□□□□ 0.2
SEC13-211ENST00000431352 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
SEC13-211ENST00000431352 DIAPH3Q9NSV4 1193 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
SEC13-211ENST00000431352 CXXC1Q9P0U4 656 aaPredicted RBP16.33■□□□□ 0.2
SEC13-211ENST00000431352 Q9Y3F1 56 aa16.33■□□□□ 0.2
SEC13-211ENST00000431352 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
SEC13-211ENST00000431352 RPS6P62753 249 aaKnown RBP16.32■□□□□ 0.2
SEC13-211ENST00000431352 PPP2R5BQ15173 497 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 RASIP1Q5U651 963 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 CHD1LQ86WJ1 897 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 USP38Q8NB14 1042 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 WNT8AQ9H1J5 351 aa16.32■□□□□ 0.2
SEC13-211ENST00000431352 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
SEC13-211ENST00000431352 WDR19Q8NEZ3 1342 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 ZNF213O14771 459 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 KDM4AO75164 1064 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 FGBP02675 491 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
SEC13-211ENST00000431352 CYP2C9P11712 490 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 CPT1AP50416 773 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 PLEKHM2Q8IWE5 1019 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 HERVK_113Q902F9 699 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 COPS5Q92905 334 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 SCLYQ96I15 445 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 TTC14Q96N46 770 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
SEC13-211ENST00000431352 MTIF3Q9H2K0 278 aaKnown RBP16.31■□□□□ 0.2
SEC13-211ENST00000431352 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
SEC13-211ENST00000431352 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
SEC13-211ENST00000431352 TNKSO95271 1327 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 ZBBXA8MT70 800 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 IGHDP01880 384 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 PURAQ00577 322 aaKnown RBP16.3■□□□□ 0.2
SEC13-211ENST00000431352 TICAM2Q86XR7 235 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
SEC13-211ENST00000431352 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
SEC13-211ENST00000431352 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
SEC13-211ENST00000431352 NKX2-4Q9H2Z4 354 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 KAT14Q9H8E8 782 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 MSRAQ9UJ68 235 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 PNMA2Q9UL42 364 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 LAMA4Q16363 1823 aa16.3■□□□□ 0.2
SEC13-211ENST00000431352 RAD50Q92878 1312 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 B4E1Z4 1266 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
SEC13-211ENST00000431352 RAB30Q15771 203 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
SEC13-211ENST00000431352 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
SEC13-211ENST00000431352 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
SEC13-211ENST00000431352 YBX2Q9Y2T7 364 aaKnown RBP16.29■□□□□ 0.2
SEC13-211ENST00000431352 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 RBM47A0AV96 593 aaKnown RBP16.28■□□□□ 0.2
SEC13-211ENST00000431352 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
SEC13-211ENST00000431352 RABGGTBP53611 331 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 NUCB1Q02818 461 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
SEC13-211ENST00000431352 BRDTQ58F21 947 aaPredicted RBP16.28■□□□□ 0.2
SEC13-211ENST00000431352 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 EXOC6Q8TAG9 804 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 PRDM6Q9NQX0 595 aa16.28■□□□□ 0.2
SEC13-211ENST00000431352 ARIH2O95376 493 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms