RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TEKT2Q9UIF3 430 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 VSTM5A8MXK1 200 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 TOR1BO14657 336 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ARIH2O95376 493 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 MTHFRP42898 656 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 UBXN1Q04323 297 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 IFIT5Q13325 482 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 PPA1Q15181 289 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CDCA2Q69YH5 1023 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 PPP4R3AQ6IN85 833 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ERAP2Q6P179 960 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 PDXDC2PQ6P474 469 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 TUBA3EQ6PEY2 450 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CCAR2Q8N163 923 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 COG8Q96MW5 612 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CATSPER2Q96P56 530 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 EIF2AQ9BY44 585 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 RASAL2Q9UJF2 1139 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ATP6V1DQ9Y5K8 247 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CAPN7Q9Y6W3 813 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 KTN1Q86UP2 1357 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 PHLDB1Q86UU1 1377 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CAPN14A8MX76 684 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 LILRB3O75022 631 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ZNF254O75437 659 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 GDI1P31150 447 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ERFP50548 548 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CSNK2BP67870 215 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ELF2Q15723 593 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 SLC45A4Q5BKX6 768 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CRTC1Q6UUV9 634 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 EEPD1Q7L9B9 569 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 BPHLQ86WA6 291 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 NPAS4Q8IUM7 802 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 IFNL3Q8IZI9 196 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 GOLM1Q8NBJ4 401 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TEKT4Q8WW24 435 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ALS2CR12Q96Q35 445 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TUBA1CQ9BQE3 449 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 FAM129AQ9BZQ8 928 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 LAMP5Q9UJQ1 280 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ANGPTL2Q9UKU9 493 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PPP2R3BQ9Y5P8 575 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PI4K2BG5E9Z4 385 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 FGAP02671 866 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PICALMQ13492 652 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CUL1Q13616 776 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 DALRD3Q5D0E6 543 aaKnown RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 MDH1BQ5I0G3 518 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 VPS53Q5VIR6 699 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CYP4F22Q6NT55 531 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TTLL7Q6ZT98 887 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 INTS8Q75QN2 995 aaKnown RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PASD1Q8IV76 773 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 MFN1Q8IWA4 741 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PI4K2BQ8TCG2 481 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 INPP5DQ92835 1189 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 LRRC45Q96CN5 670 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ACAP3Q96P50 834 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 GPATCH1Q9BRR8 931 aaKnown RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 BRD9Q9H8M2 597 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 FKBP14Q9NWM8 211 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 GSTTP1A0A1W2PQM5 241 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 H3BRB1 525 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TSPAN6O43657 245 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 BAG2O95816 211 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 MYCLP12524 364 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 NDUFV2P19404 249 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CES1P23141 567 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 IDUAP35475 653 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ACTN2P35609 894 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CDKN1CP49918 316 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 RARSP54136 660 aaKnown RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ATN1P54259 1190 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 EMC10Q5UCC4 262 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TAS1R3Q7RTX0 852 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 OSTM1Q86WC4 334 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PPFIBP2Q8ND30 876 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CFAP61Q8NHU2 1237 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TUT1Q9H6E5 874 aaKnown RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ATAD3AQ9NVI7 634 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ZBTB1Q9Y2K1 713 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 APOL1O14791 398 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CASQ2O14958 399 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CETN3O15182 167 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ZEB2O60315 1214 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 KCNJ13O60928 360 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CDC45O75419 566 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CAPN1P07384 714 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ALAS1P13196 640 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CCT8P50990 548 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC14Q49A88 953 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC183Q5T5S1 534 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 TBC1D21Q8IYX1 336 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ST13P4Q8IZP2 240 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC155Q8N6L0 562 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms