RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 UBE2SQ16763 222 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 TMEM119Q4V9L6 283 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 SYT10Q6XYQ8 523 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 TOGARAM2Q6ZUX3 1019 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 GMCL1P1Q8NEA9 526 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 CUL5Q93034 780 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
HOXC4-202ENST00000430889 DUSP9Q99956 384 aaKnown RBP15.68■□□□□ 0.1
HOXC4-202ENST00000430889 NAA15Q9BXJ9 866 aaKnown RBP15.68■□□□□ 0.1
HOXC4-202ENST00000430889 GTPBP4Q9BZE4 634 aaKnown RBP15.68■□□□□ 0.1
HOXC4-202ENST00000430889 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 STK17AQ9UEE5 414 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 COL4A5P29400 1685 aa15.68■□□□□ 0.1
HOXC4-202ENST00000430889 ZSCAN12O43309 604 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 SEPT2Q15019 361 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 QRICH1Q2TAL8 776 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 TMEM179Q6ZVK1 233 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 RASSF8Q8NHQ8 419 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 HAS1Q92839 578 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 CCDC51Q96ER9 411 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 MBOAT7Q96N66 472 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 CCT6AP40227 531 aaKnown RBP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 TXKP42681 527 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 FXR1P51114 621 aaKnown RBP eCLIP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 MRPL12P52815 198 aaKnown RBP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 JAG1P78504 1218 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 SLFN13Q68D06 897 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 ZNF507Q8TCN5 953 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 NOC3LQ8WTT2 800 aaKnown RBP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 CRYGNQ8WXF5 182 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 GLT8D2Q9H1C3 349 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 TAB2Q9NYJ8 693 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
HOXC4-202ENST00000430889 RGS17Q9UGC6 210 aaPredicted RBP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
HOXC4-202ENST00000430889 GOLGA6L9A6NEM1 432 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 PSMA7O14818 248 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 CCNE1P24864 410 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
HOXC4-202ENST00000430889 PPP1R2P41236 205 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 TNNI2P48788 182 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 EHHADHQ08426 723 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
HOXC4-202ENST00000430889 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
HOXC4-202ENST00000430889 HYIQ5T013 277 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 RAD9BQ6WBX8 426 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 CALML4Q96GE6 196 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 PSTPIP2Q9H939 334 aa15.66■□□□□ 0.1
HOXC4-202ENST00000430889 CYP3A7-CYP3A51PA0A087WV96 503 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 MYMKA6NI61 221 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 LGALS16A8MUM7 142 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 RNF225M0QZC1 329 aaPredicted RBP15.65■□□□□ 0.1
HOXC4-202ENST00000430889 N4BP3O15049 544 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 CYP3A7P24462 503 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 SLC1A4P43007 532 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 MMP14P50281 582 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 AMPD3Q01432 767 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 ATP2B2Q01814 1243 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 ICA1Q05084 483 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 STK4Q13043 487 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 STIM1Q13586 685 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 TRIM14Q14142 442 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 NAA30Q147X3 362 aaPredicted RBP15.65■□□□□ 0.1
HOXC4-202ENST00000430889 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 PPFIBP1Q86W92 1011 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 CNGA4Q8IV77 575 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 KIAA0895Q8NCT3 520 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 ERO1AQ96HE7 468 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
HOXC4-202ENST00000430889 GMLQ99445 158 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 VPS16Q9H269 839 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 TDRD3Q9H7E2 651 aaKnown RBP15.65■□□□□ 0.1
HOXC4-202ENST00000430889 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
HOXC4-202ENST00000430889 SYNPO2Q9UMS6 1093 aa15.65■□□□□ 0.1
HOXC4-202ENST00000430889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.65■□□□□ 0.1
HOXC4-202ENST00000430889 PVALEFA0A1B0GWK0 134 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 A0A1W2PQC6 194 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 POTEMA6NI47 508 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 SOWAHDA6NJG2 315 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
HOXC4-202ENST00000430889 CASP14P31944 242 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
HOXC4-202ENST00000430889 ASIC1P78348 528 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 PDE4DQ08499 809 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 MTF1Q14872 753 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 CDC37Q16543 378 aaPredicted RBP15.64■□□□□ 0.09
HOXC4-202ENST00000430889 BTNL9Q6UXG8 535 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 RAD54LQ92698 747 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 P2RX5Q93086 422 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 NAP1L4Q99733 375 aaKnown RBP15.64■□□□□ 0.09
HOXC4-202ENST00000430889 EXOC1Q9NV70 894 aa15.64■□□□□ 0.09
HOXC4-202ENST00000430889 DDX25Q9UHL0 483 aaKnown RBP15.64■□□□□ 0.09
HOXC4-202ENST00000430889 MEIS2O14770 477 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms