RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 STRNO43815 780 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 CFBP00751 764 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 GNRH1P01148 92 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 AP3B2Q13367 1082 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 GRB14Q14449 540 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 KRT40Q6A162 431 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 MCTP2Q6DN12 878 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 REXO1Q8N1G1 1221 aaKnown RBP12.63□□□□□ -0.39
CHD4-202ENST00000430771 PSTPIP2Q9H939 334 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 EHMT1Q9H9B1 1298 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
CHD4-202ENST00000430771 PCNTO95613 3336 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 SLC15A5A6NIM6 579 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 SPDYE3A6NKU9 549 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 DTNBO60941 627 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 MMP1P03956 469 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 HSPA1AP0DMV8 641 aaKnown RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 HSPA1BP0DMV9 641 aaKnown RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 PTPREP23469 700 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 KRT2P35908 639 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 PSMC4P43686 418 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 HSD17B4P51659 736 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 RPS6P62753 249 aaKnown RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 MPHOSPH6Q99547 160 aaKnown RBP12.62□□□□□ -0.39
CHD4-202ENST00000430771 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 PHF20Q9BVI0 1012 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 CYP39A1Q9NYL5 469 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
CHD4-202ENST00000430771 ZNFX1Q9P2E3 1918 aaKnown RBP12.61□□□□□ -0.39
CHD4-202ENST00000430771 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 OPLAHO14841 1288 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 HOXD10P28358 340 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 ADORA2AP29274 412 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 RGS2P41220 211 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 CTCFP49711 727 aaPredicted RBP12.61□□□□□ -0.39
CHD4-202ENST00000430771 BLIDQ8IZY5 108 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 APBA2Q99767 749 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 ADD3Q9UEY8 706 aaKnown RBP12.61□□□□□ -0.39
CHD4-202ENST00000430771 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
CHD4-202ENST00000430771 LOC102724159A0A0B4J2E5 919 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 B4DLN1 442 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 PRMT2P55345 433 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 BAATQ14032 418 aaPredicted RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 PWP2Q15269 919 aaKnown RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 UBE2SQ16763 222 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 MORN1Q5T089 497 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 SYTL5Q8TDW5 730 aaPredicted RBP12.6□□□□□ -0.39
CHD4-202ENST00000430771 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 ANO3Q9BYT9 981 aa12.6□□□□□ -0.39
CHD4-202ENST00000430771 DNAJC25-GNG10A0A024R161 153 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 CCDC194A0A1B0GVG4 234 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 MEIS2O14770 477 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 FOXN1O15353 648 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 STX6O43752 255 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
CHD4-202ENST00000430771 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
CHD4-202ENST00000430771 SYT1P21579 422 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
CHD4-202ENST00000430771 USP17L6PQ6QN14 398 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 KRT25Q7Z3Z0 450 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 FAM133AQ8N9E0 248 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
CHD4-202ENST00000430771 ARHGAP39Q9C0H5 1083 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 FOXP1Q9H334 677 aaPredicted RBP12.59□□□□□ -0.39
CHD4-202ENST00000430771 GJB4Q9NTQ9 266 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 DIS3Q9Y2L1 958 aaKnown RBP12.59□□□□□ -0.39
CHD4-202ENST00000430771 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
CHD4-202ENST00000430771 MYH15Q9Y2K3 1946 aa12.58□□□□□ -0.39
CHD4-202ENST00000430771 PGK2P07205 417 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 HOXC6P09630 235 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 CTGFP29279 349 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
CHD4-202ENST00000430771 NPY5RQ15761 445 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 ARHGEF16Q5VV41 709 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
CHD4-202ENST00000430771 FCHSD1Q86WN1 690 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
CHD4-202ENST00000430771 DOCK3Q8IZD9 2030 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms