RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MYLIPQ8WY64 445 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
MSH5-208ENST00000429846 A0A0C4DFX4 3053 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 CCDC178Q5BJE1 867 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 CHD1LQ86WJ1 897 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 DNERQ8NFT8 737 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 MAF1Q9H063 256 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 HIPK3Q9H422 1215 aa17.49■□□□□ 0.39
MSH5-208ENST00000429846 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
MSH5-208ENST00000429846 UNC80Q8N2C7 3258 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 RBM47A0AV96 593 aaKnown RBP17.48■□□□□ 0.39
MSH5-208ENST00000429846 B4DLN1 442 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 HIP1O00291 1037 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 ZNF213O14771 459 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 NKRFO15226 690 aaKnown RBP eCLIP17.48■□□□□ 0.39
MSH5-208ENST00000429846 CPT1AP50416 773 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 MRPL12P52815 198 aaKnown RBP17.48■□□□□ 0.39
MSH5-208ENST00000429846 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 RNF207Q6ZRF8 634 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 C16orf59Q7L2K0 433 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 IQCA1Q86XH1 822 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 PLEKHM2Q8IWE5 1019 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 CLEC4DQ8WXI8 215 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 TIFAQ96CG3 184 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 PURBQ96QR8 312 aaKnown RBP17.48■□□□□ 0.39
MSH5-208ENST00000429846 WDR11Q9BZH6 1224 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 IL23AQ9NPF7 189 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 POLR3EQ9NVU0 708 aa17.48■□□□□ 0.39
MSH5-208ENST00000429846 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 NEDD4P46934 1319 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 RAD50Q92878 1312 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 CALML3P27482 149 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 CYP2C18P33260 490 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 RPS6P62753 249 aaKnown RBP17.47■□□□□ 0.39
MSH5-208ENST00000429846 NUCB1Q02818 461 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
MSH5-208ENST00000429846 ZNF365Q70YC5 407 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 HERVK_113Q902F9 699 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 COL25A1Q9BXS0 654 aaPredicted RBP17.47■□□□□ 0.39
MSH5-208ENST00000429846 ZNF576Q9H609 170 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 DIAPH3Q9NSV4 1193 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 SCN10AQ9Y5Y9 1956 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 MYH6P13533 1939 aa17.47■□□□□ 0.39
MSH5-208ENST00000429846 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 B4GALT4O60513 344 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 SUPT20HL2P0C7V6 817 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 EDNRBP24530 442 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 RGS22Q8NE09 1264 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 DSCC1Q9BVC3 393 aa17.46■□□□□ 0.39
MSH5-208ENST00000429846 NOC4LQ9BVI4 516 aaKnown RBP17.46■□□□□ 0.39
MSH5-208ENST00000429846 ACRP10323 421 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 PTGS1P23219 599 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 PURAQ00577 322 aaKnown RBP17.45■□□□□ 0.38
MSH5-208ENST00000429846 PDE4DQ08499 809 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 GRIN2CQ14957 1233 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 RAB30Q15771 203 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 CWC27Q6UX04 472 aaKnown RBP17.45■□□□□ 0.38
MSH5-208ENST00000429846 PNMA1Q8ND90 353 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
MSH5-208ENST00000429846 GBF1Q92538 1859 aa17.45■□□□□ 0.38
MSH5-208ENST00000429846 KDM4AO75164 1064 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 FGBP02675 491 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 PSMC6P62333 389 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 ASPRV1Q53RT3 343 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 TMEM63BQ5T3F8 832 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 OR6J1Q8NGC5 347 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 ANKS1AQ92625 1134 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 ZKSCAN3Q9BRR0 538 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 TRPV6Q9H1D0 765 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 GPHNQ9NQX3 736 aaPredicted RBP17.44■□□□□ 0.38
MSH5-208ENST00000429846 ABCB11O95342 1321 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
MSH5-208ENST00000429846 KPNA6O60684 536 aa17.43■□□□□ 0.38
MSH5-208ENST00000429846 PFKMP08237 780 aa17.43■□□□□ 0.38
MSH5-208ENST00000429846 CDC37Q16543 378 aaPredicted RBP17.43■□□□□ 0.38
MSH5-208ENST00000429846 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
MSH5-208ENST00000429846 RPUSD2Q8IZ73 545 aaKnown RBP17.43■□□□□ 0.38
MSH5-208ENST00000429846 GAS2L1Q99501 681 aaPredicted RBP17.43■□□□□ 0.38
MSH5-208ENST00000429846 MTG1Q9BT17 334 aaPredicted RBP17.43■□□□□ 0.38
MSH5-208ENST00000429846 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
MSH5-208ENST00000429846 MSRAQ9UJ68 235 aa17.43■□□□□ 0.38
MSH5-208ENST00000429846 TANC1Q9C0D5 1861 aa17.43■□□□□ 0.38
MSH5-208ENST00000429846 KIAA1217Q5T5P2 1943 aa17.43■□□□□ 0.38
MSH5-208ENST00000429846 IGHDP01880 384 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 GOLGA8HP0CJ92 632 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 CCL23P55773 120 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 TTLL4Q14679 1199 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 USH1GQ495M9 461 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
MSH5-208ENST00000429846 KRT23Q9C075 422 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 WNT8AQ9H1J5 351 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 CNNM2Q9H8M5 875 aa17.42■□□□□ 0.38
MSH5-208ENST00000429846 TNKSO95271 1327 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms