RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FGAP02671 866 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 NR1D1P20393 614 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 SFSWAPQ12872 951 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 HVCN1Q96D96 273 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 PCMTD1Q96MG8 357 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 PLA2G12BQ9BX93 195 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 SAMD15Q9P1V8 674 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 RGPD2P0DJD1 1756 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 RGPD5Q99666 1765 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 LSP1P33241 339 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 ZAP70P43403 619 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 MAGEB6Q8N7X4 407 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 CCDC51Q96ER9 411 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 KAZALD1Q96I82 304 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 IFT74Q96LB3 600 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 FTOQ9C0B1 505 aaKnown RBP eCLIP15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 STK38LQ9Y2H1 464 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 C15orf41Q9Y2V0 281 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 DEXIO95424 95 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 ALDH1B1P30837 517 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 YTHDF3Q7Z739 585 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 TCHHQ07283 1943 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 RTN2O75298 545 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 PPP1R37O75864 691 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 USP14P54578 494 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 GUCY1A3Q02108 690 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 TRIM14Q14142 442 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 MAB21L3Q8N8X9 362 aa15.89■□□□□ 0.13
SYNGAP1-203ENST00000428982 PAX3P23760 479 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 POSTNQ15063 836 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 SPATA5Q8NB90 893 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 PROCA1Q8NCQ7 364 aaPredicted RBP15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 GORASP1Q9BQQ3 440 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 AGXT2Q9BYV1 514 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 FESP07332 822 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 ALS2CLQ60I27 953 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 FBXL16Q8N461 479 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 CRNKL1Q9BZJ0 848 aaKnown RBP15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 SLC39A2Q9NP94 309 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 ZNF232Q9UNY5 417 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 RAD21O60216 631 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 EVI5O60447 810 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 UBE3CQ15386 1083 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 MAP7D1Q3KQU3 841 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 CACNA2D4Q7Z3S7 1137 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 MAGEC3Q8TD91 643 aa15.88■□□□□ 0.13
SYNGAP1-203ENST00000428982 ATP6V1G1O75348 118 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 SF3A3Q12874 501 aaKnown RBP eCLIP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 CCDC6Q16204 474 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 KLHL10Q6JEL2 608 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 WDR93Q6P2C0 686 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 NOA1Q8NC60 698 aaKnown RBP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 IFT81Q8WYA0 676 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 ZNF287Q9HBT7 754 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 ATXN2Q99700 1313 aaKnown RBP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 LUC7L2Q9Y383 392 aaKnown RBP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 LTBP4Q8N2S1 1624 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 M0R2C6 588 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 PDHA1P08559 390 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 CALM1P0DP23 149 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 CALM2P0DP24 149 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 CALM3P0DP25 149 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 MIS18BP1Q6P0N0 1132 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 OR8K1Q8NGG5 319 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 BORCS6Q96GS4 357 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 FGD4Q96M96 766 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 TMOD2Q9NZR1 351 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 SLC4A4Q9Y6R1 1079 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 NHSL1Q5SYE7 1610 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 SOWAHDA6NJG2 315 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 PARP1P09874 1014 aaKnown RBP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 ADORA1P30542 326 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 CTNNBL1Q8WYA6 563 aaPredicted RBP15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 ESR2Q92731 530 aa15.87■□□□□ 0.13
SYNGAP1-203ENST00000428982 SHOX2O60902 331 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 CA8P35219 290 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 GCLCP48506 637 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 APBA1Q02410 837 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 PRPF4BQ13523 1007 aaKnown RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 ABTB1Q969K4 478 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 EPAS1Q99814 870 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 ATP6V1G2O95670 118 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 RNF10Q8N5U6 811 aaKnown RBP15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 P3H4Q92791 437 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 OSBP2Q969R2 916 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 MTRQ99707 1265 aa15.86■□□□□ 0.13
SYNGAP1-203ENST00000428982 NSRP1Q9H0G5 558 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms