RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KIAA1683Q9H0B3 1180 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 TADA3O75528 432 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 KIF5BP33176 963 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 KRT85P78386 507 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.35
CECR3-201ENST00000428828 PPIL2Q13356 520 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.35
CECR3-201ENST00000428828 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 TMX1Q9H3N1 280 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 TLL2Q9Y6L7 1015 aa12.9□□□□□ -0.35
CECR3-201ENST00000428828 RLFQ13129 1914 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 BMP3P12645 472 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 VCAM1P19320 739 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 SLC16A2P36021 539 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 USP14P54578 494 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 FOXD4L6Q3SYB3 417 aaPredicted RBP12.89□□□□□ -0.35
CECR3-201ENST00000428828 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
CECR3-201ENST00000428828 FOXD4L3Q6VB84 417 aaPredicted RBP12.89□□□□□ -0.35
CECR3-201ENST00000428828 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
CECR3-201ENST00000428828 DCAF4Q8WV16 495 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 PHKBQ93100 1093 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
CECR3-201ENST00000428828 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
CECR3-201ENST00000428828 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 NID2Q14112 1375 aa12.89□□□□□ -0.35
CECR3-201ENST00000428828 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 SNHG28P0DPA3 235 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 RCAN1P53805 252 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 DNM1Q05193 864 aaKnown RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 IQCB1Q15051 598 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 RGMBQ6NW40 437 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 RASAL3Q86YV0 1011 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 SCAND2PQ9GZW5 306 aaPredicted RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 SMCHD1A6NHR9 2005 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 hCG_1642624A0A1W2PR95 340 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 JAK2O60674 1132 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 TMTC3Q6ZXV5 915 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 RPAP3Q9H6T3 665 aaPredicted RBP12.88□□□□□ -0.35
CECR3-201ENST00000428828 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
CECR3-201ENST00000428828 A0A0G2JLL6 359 aaPredicted RBP12.87□□□□□ -0.35
CECR3-201ENST00000428828 GOLGA6L19H0YKK7 550 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
CECR3-201ENST00000428828 NRDCO43847 1150 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 APLP1P51693 650 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 ETF1P62495 437 aaKnown RBP12.87□□□□□ -0.35
CECR3-201ENST00000428828 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 TREML2Q5T2D2 321 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 PRRT2Q7Z6L0 340 aaPredicted RBP12.87□□□□□ -0.35
CECR3-201ENST00000428828 SRBD1Q8N5C6 995 aaKnown RBP12.87□□□□□ -0.35
CECR3-201ENST00000428828 LPAR1Q92633 364 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 SLC26A6Q9BXS9 759 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 KCNH4Q9UQ05 1017 aa12.87□□□□□ -0.35
CECR3-201ENST00000428828 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 CXCL11O14625 94 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 MAP2K7O14733 419 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 CTAGE5O15320 804 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 SASH3O75995 380 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 USP8P40818 1118 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 HTRA3P83110 453 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
CECR3-201ENST00000428828 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
CECR3-201ENST00000428828 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
CECR3-201ENST00000428828 FBXO28Q9NVF7 368 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 ZBTB48P10074 688 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms