RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ESR2Q92731 530 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 PPP1R12CQ9BZL4 782 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 RNF41Q9H4P4 317 aaPredicted RBP18.24■□□□□ 0.51
SEC13-210ENST00000428626 PRUNE2Q8WUY3 3088 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 B4E1Z4 1266 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 CALML3P27482 149 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
SEC13-210ENST00000428626 RPS6P62753 249 aaKnown RBP18.23■□□□□ 0.51
SEC13-210ENST00000428626 TMEM240Q5SV17 173 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 AP5M1Q9H0R1 490 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
SEC13-210ENST00000428626 RBM47A0AV96 593 aaKnown RBP18.22■□□□□ 0.51
SEC13-210ENST00000428626 ACRP10323 421 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 GSPT1P15170 499 aaKnown RBP18.22■□□□□ 0.51
SEC13-210ENST00000428626 CYP2C18P33260 490 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 ITGA7Q13683 1181 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 DUSP28Q4G0W2 176 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 RNF207Q6ZRF8 634 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 ENAHQ8N8S7 591 aaPredicted RBP18.22■□□□□ 0.51
SEC13-210ENST00000428626 PNMA1Q8ND90 353 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 TBC1D5Q92609 795 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 DSCC1Q9BVC3 393 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 TRPV6Q9H1D0 765 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 Q9Y3F1 56 aa18.22■□□□□ 0.51
SEC13-210ENST00000428626 EDNRBP24530 442 aa18.21■□□□□ 0.51
SEC13-210ENST00000428626 USH1GQ495M9 461 aa18.21■□□□□ 0.51
SEC13-210ENST00000428626 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
SEC13-210ENST00000428626 MYLIPQ8WY64 445 aa18.21■□□□□ 0.51
SEC13-210ENST00000428626 WDR11Q9BZH6 1224 aa18.21■□□□□ 0.51
SEC13-210ENST00000428626 ZSWIM5Q9P217 1185 aa18.21■□□□□ 0.51
SEC13-210ENST00000428626 ADD3Q9UEY8 706 aaKnown RBP18.21■□□□□ 0.51
SEC13-210ENST00000428626 GRXCR1A8MXD5 290 aa18.2■□□□□ 0.5
SEC13-210ENST00000428626 B4GALT4O60513 344 aa18.2■□□□□ 0.5
SEC13-210ENST00000428626 CABYRO75952 493 aa18.2■□□□□ 0.5
SEC13-210ENST00000428626 GPATCH4Q5T3I0 446 aaKnown RBP18.2■□□□□ 0.5
SEC13-210ENST00000428626 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
SEC13-210ENST00000428626 COPS5Q92905 334 aa18.2■□□□□ 0.5
SEC13-210ENST00000428626 VWCEQ96DN2 955 aa18.2■□□□□ 0.5
SEC13-210ENST00000428626 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
SEC13-210ENST00000428626 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
SEC13-210ENST00000428626 VCANP13611 3396 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 CHD9Q3L8U1 2897 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 LOC102724159A0A0B4J2E5 919 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 TLR3O15455 904 aaKnown RBP18.19■□□□□ 0.5
SEC13-210ENST00000428626 DNAJB2P25686 324 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 PPIGQ13427 754 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEC13-210ENST00000428626 PWP2Q15269 919 aaKnown RBP18.19■□□□□ 0.5
SEC13-210ENST00000428626 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
SEC13-210ENST00000428626 ADGRF4Q8IZF3 695 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 TNKSO95271 1327 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 SCN10AQ9Y5Y9 1956 aa18.19■□□□□ 0.5
SEC13-210ENST00000428626 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.18■□□□□ 0.5
SEC13-210ENST00000428626 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.18■□□□□ 0.5
SEC13-210ENST00000428626 HIP1O00291 1037 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 ARIH2O95376 493 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 PBX2P40425 430 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 PURAQ00577 322 aaKnown RBP18.18■□□□□ 0.5
SEC13-210ENST00000428626 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 IQCA1Q86XH1 822 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 TMEM199Q8N511 208 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
SEC13-210ENST00000428626 WNT8AQ9H1J5 351 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 HIPK3Q9H422 1215 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 KAT14Q9H8E8 782 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 CXXC1Q9P0U4 656 aaPredicted RBP18.18■□□□□ 0.5
SEC13-210ENST00000428626 MYO9BQ13459 2157 aa18.18■□□□□ 0.5
SEC13-210ENST00000428626 ZEB2O60315 1214 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 CCL23P55773 120 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 PDE4DQ08499 809 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
SEC13-210ENST00000428626 QRICH1Q2TAL8 776 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 TTC22Q5TAA0 569 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 CYB5R4Q7L1T6 521 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEC13-210ENST00000428626 STAG2Q8N3U4 1231 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 DNERQ8NFT8 737 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
SEC13-210ENST00000428626 JMJD4Q9H9V9 463 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 IL23AQ9NPF7 189 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
SEC13-210ENST00000428626 TAF6LQ9Y6J9 622 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 MYH6P13533 1939 aa18.17■□□□□ 0.5
SEC13-210ENST00000428626 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
SEC13-210ENST00000428626 SEC23AQ15436 765 aa18.16■□□□□ 0.5
SEC13-210ENST00000428626 SLC35G1Q2M3R5 365 aa18.16■□□□□ 0.5
SEC13-210ENST00000428626 RGS22Q8NE09 1264 aa18.16■□□□□ 0.5
SEC13-210ENST00000428626 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
SEC13-210ENST00000428626 MAFAQ8NHW3 353 aaPredicted RBP18.16■□□□□ 0.5
SEC13-210ENST00000428626 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
SEC13-210ENST00000428626 PBX4Q9BYU1 374 aa18.16■□□□□ 0.5
SEC13-210ENST00000428626 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
SEC13-210ENST00000428626 TMEM265A0A087WTH1 108 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 OPLAHO14841 1288 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 MYL3P08590 195 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms