RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ADGRB3O60242 1522 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 GOLGA8QA0A0J9YX86 632 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 GOLGA8OA6NCC3 632 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 LRRIQ4A6NIV6 560 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 ZNF233A6NK53 670 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 GOLGA8NF8WBI6 632 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 HGSO14964 777 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-208ENST00000428599 ADCY8P40145 1251 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 COG7P83436 770 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 PPP2R5AQ15172 486 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 AOC3Q16853 763 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 POTEDQ86YR6 584 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 UBN1Q9NPG3 1134 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
CTNND1-208ENST00000428599 CPSF3Q9UKF6 684 aaKnown RBP9.78□□□□□ -0.84
CTNND1-208ENST00000428599 ABCA9Q8IUA7 1624 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 A0A0D9SFI3 127 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 hCG_1642624A0A1W2PR95 340 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 PIK3CAP42336 1068 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 USP14P54578 494 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 RRAGAQ7L523 313 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 IFNL3Q8IZI9 196 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 MYOCDQ8IZQ8 938 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 TRIML1Q8N9V2 468 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 GANCQ8TET4 914 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 AKT3Q9Y243 479 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 CEP152O94986 1710 aa9.77□□□□□ -0.84
CTNND1-208ENST00000428599 NFKBIAP25963 317 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ADORA1P30542 326 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 PPP2R5EQ16537 467 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 RNF10Q8N5U6 811 aaKnown RBP9.77□□□□□ -0.85
CTNND1-208ENST00000428599 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ARHGAP42A6NI28 874 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 SAT1P21673 171 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ICA1Q05084 483 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 CCDC38Q502W7 563 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ATP6V1E2Q96A05 226 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ZBTB9Q96C00 473 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 SNX25Q9H3E2 840 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 COPRSQ9NQ92 184 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 CCDC13Q8IYE1 715 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 NACC1Q96RE7 527 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ITM2BQ9Y287 266 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 CDC42BPBQ9Y5S2 1711 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 TTC4O95801 387 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 ARMCX5Q6P1M9 558 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 PLA2G4DQ86XP0 818 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 EFCAB13Q8IY85 973 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
CTNND1-208ENST00000428599 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 TYW1Q9NV66 732 aaKnown RBP9.77□□□□□ -0.85
CTNND1-208ENST00000428599 LEMD3Q9Y2U8 911 aa9.77□□□□□ -0.85
CTNND1-208ENST00000428599 UNC13BO14795 1591 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 SMIM24O75264 130 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ANXA13P27216 316 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 KRT33BQ14525 404 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 SUPT20HL1Q3ZLR7 823 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 MMEL1Q495T6 779 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 NLRP10Q86W26 655 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ERO1AQ96HE7 468 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 LRGUKQ96M69 825 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 RGS16O15492 202 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 CIAO1O76071 339 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 DLATP10515 647 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 KRT40Q6A162 431 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 PRPF38AQ8NAV1 312 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ADD3Q9UEY8 706 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 FRMPD2Q68DX3 1309 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ARHGAP25P42331 645 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 BFSP1Q12934 665 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 FAM178BQ8IXR5 827 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ANKRD42Q8N9B4 389 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 CABS1Q96KC9 395 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 FAM207AQ9NSI2 230 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 LARSQ9P2J5 1176 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ABT1Q9ULW3 272 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ATF5Q9Y2D1 282 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 TNS3Q68CZ2 1445 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 WDR64B1ANS9 1081 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ELF1P32519 619 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 CASP2P42575 452 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 Q9H521 79 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 COL4A3BPQ9Y5P4 624 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 SETD1BQ9UPS6 1966 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 EIF3CLB5ME19 914 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 ERVV-1B6SEH8 477 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 GPC4O75487 556 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 EIF3CQ99613 913 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 BLZF1Q9H2G9 400 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 PANK4Q9NVE7 773 aa9.76□□□□□ -0.85
CTNND1-208ENST00000428599 CPSF2Q9P2I0 782 aaKnown RBP9.76□□□□□ -0.85
CTNND1-208ENST00000428599 IMPACTQ9P2X3 320 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms