RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TNKSO95271 1327 aa18.08■□□□□ 0.49
CTDSP1-202ENST00000428361 ABCB11O95342 1321 aa18.08■□□□□ 0.49
CTDSP1-202ENST00000428361 TMEM265A0A087WTH1 108 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 PARP1P09874 1014 aaKnown RBP18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 SMPD1P17405 629 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 CPT1AP50416 773 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 PDE4DQ08499 809 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 DUSP28Q4G0W2 176 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 TAPT1Q6NXT6 567 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 Q7L0L9 218 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 SLC17A8Q8NDX2 589 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 POLR3EQ9NVU0 708 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 LRRC37A2A6NM11 1700 aa18.08■□□□□ 0.48
CTDSP1-202ENST00000428361 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 RPS6P62753 249 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 BEX3Q00994 111 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 TRAF1Q13077 416 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 C9orf50Q5SZB4 431 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 IFIT1BQ5T764 474 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 CLEC4DQ8WXI8 215 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 GPHNQ9NQX3 736 aaPredicted RBP18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 ZSWIM5Q9P217 1185 aa18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 U3KPZ7 1027 aaPredicted RBP18.07■□□□□ 0.48
CTDSP1-202ENST00000428361 CTAGE5O15320 804 aa18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 PPP2R5BQ15173 497 aa18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 USH1GQ495M9 461 aa18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 PSRC1Q6PGN9 363 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 SLC30A10Q6XR72 485 aa18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 ENAHQ8N8S7 591 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 MTIF3Q9H2K0 278 aaKnown RBP18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 MRPL11Q9Y3B7 192 aaKnown RBP18.06■□□□□ 0.48
CTDSP1-202ENST00000428361 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 ERICH2A1L162 156 aa18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 KPNA6O60684 536 aa18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 GOLGA8HP0CJ92 632 aa18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 ITGB8P26012 769 aa18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 SART3Q15020 963 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 SLC43A3Q8NBI5 491 aa18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 PDGFCQ9NRA1 345 aa18.05■□□□□ 0.48
CTDSP1-202ENST00000428361 SUPT20HL2P0C7V6 817 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 EDNRBP24530 442 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 TTLL4Q14679 1199 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 FBXO11Q86XK2 927 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 OR6J1Q8NGC5 347 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 UBA5Q9GZZ9 404 aa18.04■□□□□ 0.48
CTDSP1-202ENST00000428361 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 CD4P01730 458 aa18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 GSPT1P15170 499 aaKnown RBP18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 IRX5P78411 483 aaPredicted RBP18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 SAMD3Q8N6K7 520 aa18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 NSUN6Q8TEA1 469 aaKnown RBP18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 PURBQ96QR8 312 aaKnown RBP18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 IWS1Q96ST2 819 aa18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 LCTP09848 1927 aa18.03■□□□□ 0.48
CTDSP1-202ENST00000428361 PDE4AP27815 886 aa18.02■□□□□ 0.48
CTDSP1-202ENST00000428361 MTG1Q9BT17 334 aaPredicted RBP18.02■□□□□ 0.48
CTDSP1-202ENST00000428361 AMNQ9BXJ7 453 aa18.02■□□□□ 0.48
CTDSP1-202ENST00000428361 HIPK3Q9H422 1215 aa18.02■□□□□ 0.48
CTDSP1-202ENST00000428361 MAP3K20Q9NYL2 800 aaKnown RBP18.02■□□□□ 0.48
CTDSP1-202ENST00000428361 CHMLP26374 656 aa18.01■□□□□ 0.47
CTDSP1-202ENST00000428361 QRICH1Q2TAL8 776 aa18.01■□□□□ 0.47
CTDSP1-202ENST00000428361 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
CTDSP1-202ENST00000428361 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
CTDSP1-202ENST00000428361 MYL3P08590 195 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 TXNP10599 105 aaKnown RBP18■□□□□ 0.47
CTDSP1-202ENST00000428361 EPHB4P54760 987 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 STXBP2Q15833 593 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 RPUSD2Q8IZ73 545 aaKnown RBP18■□□□□ 0.47
CTDSP1-202ENST00000428361 FAM161BQ96MY7 647 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 GUCD1Q96NT3 240 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.471e-10■■□□□ 14.1
CTDSP1-202ENST00000428361 SEMA6BQ9H3T3 888 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 IL23AQ9NPF7 189 aa18■□□□□ 0.47
CTDSP1-202ENST00000428361 KLRF2D3W0D1 207 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 IFIT3O14879 490 aaKnown RBP17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 PFKMP08237 780 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 CSF2RAP15509 400 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 PURAQ00577 322 aaKnown RBP17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 PTPN11Q06124 597 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 SEC23AQ15436 765 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 ARHGEF16Q5VV41 709 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 SYTL5Q8TDW5 730 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 RMDN3Q96TC7 470 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 CPVLQ9H3G5 476 aa17.99■□□□□ 0.47
CTDSP1-202ENST00000428361 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms