RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 ABCB11O95342 1321 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 KRT9P35527 623 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 PSMD2Q13200 908 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 CSGALNACT2Q8N6G5 542 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 CDK5RAP3Q96JB5 506 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 ZDHHC15Q96MV8 337 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 WDR24Q96S15 920 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 DESI2Q9BSY9 194 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 MMTAG2Q9BU76 263 aaKnown RBP22.52■■□□□ 1.2
PMPCB-202ENST00000428154 JMJD4Q9H9V9 463 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 DDX4Q9NQI0 724 aaKnown RBP22.52■■□□□ 1.2
PMPCB-202ENST00000428154 CAPN11Q9UMQ6 739 aa22.52■■□□□ 1.2
PMPCB-202ENST00000428154 FRMPD2Q68DX3 1309 aaPredicted RBP22.52■■□□□ 1.2
PMPCB-202ENST00000428154 ATP8B1O43520 1251 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 CLK2P49760 499 aaKnown RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 BMS1Q14692 1282 aaKnown RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 ARHGAP29Q52LW3 1261 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 CDC42EP5Q6NZY7 148 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 UNC13DQ70J99 1090 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 LRRC47Q8N1G4 583 aaKnown RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 GPR161Q8N6U8 529 aaKnown RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 MKL1Q969V6 931 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 CARD6Q9BX69 1037 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 MRPL44Q9H9J2 332 aaKnown RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 LUC7L2Q9Y383 392 aaKnown RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 V9GYY5 206 aaPredicted RBP22.51■■□□□ 1.19
PMPCB-202ENST00000428154 ZBTB5O15062 677 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 HSPA1LP34931 641 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 CBX1P83916 185 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 MTF1Q14872 753 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 FIGNQ5HY92 759 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 KRT79Q5XKE5 535 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 ZNF662Q6ZS27 426 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 ADGRF4Q8IZF3 695 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 DNAJC7Q99615 494 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 FAM53CQ9NYF3 392 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 MAPK8IP1Q9UQF2 711 aa22.51■■□□□ 1.19
PMPCB-202ENST00000428154 MYH4Q9Y623 1939 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 FANCGO15287 622 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 TXKP42681 527 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 PPP2R3AQ06190 1150 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 APOBEC3HQ6NTF7 200 aaKnown RBP22.5■■□□□ 1.19
PMPCB-202ENST00000428154 PROM2Q8N271 834 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 CEP112Q8N8E3 955 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 DCAF4Q8WV16 495 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 LARP4BQ92615 738 aaKnown RBP22.5■■□□□ 1.19
PMPCB-202ENST00000428154 AKT1S1Q96B36 256 aa22.5■■□□□ 1.19
PMPCB-202ENST00000428154 DUSP9Q99956 384 aaKnown RBP22.5■■□□□ 1.19
PMPCB-202ENST00000428154 TRIM49BA6NDI0 452 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 KRT222Q8N1A0 295 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 RABGGTAQ92696 567 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 COA7Q96BR5 231 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 TUBGCP2Q9BSJ2 902 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 GPCPD1Q9NPB8 672 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 NYAP2Q9P242 653 aa22.49■■□□□ 1.19
PMPCB-202ENST00000428154 CRKP46108 304 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 GRB10Q13322 594 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 STRIP1Q5VSL9 837 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 CENPPQ6IPU0 288 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 TEX2Q8IWB9 1127 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 ZSCAN29Q8IWY8 852 aaPredicted RBP22.48■■□□□ 1.19
PMPCB-202ENST00000428154 LRRC15Q8TF66 581 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 PLIN2Q99541 437 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 ARID3AQ99856 593 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 IDI2Q9BXS1 227 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 TMEM260Q9NX78 707 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 KDM3AQ9Y4C1 1321 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 A0A1W2PQJ5 194 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
PMPCB-202ENST00000428154 PMS1P54277 932 aaKnown RBP22.48■■□□□ 1.19
PMPCB-202ENST00000428154 ERVK-24P63145 666 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 GUF1Q8N442 669 aaKnown RBP22.48■■□□□ 1.19
PMPCB-202ENST00000428154 GOLGA1Q92805 767 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 ERGIC2Q96RQ1 377 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 NT5C3AQ9H0P0 336 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 KANSL2Q9H9L4 492 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 CDC23Q9UJX2 597 aa22.48■■□□□ 1.19
PMPCB-202ENST00000428154 EPN1Q9Y6I3 576 aaPredicted RBP22.48■■□□□ 1.19
PMPCB-202ENST00000428154 CTAGE9A4FU28 777 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 POTEB2H3BUK9 544 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 KRT83P78385 493 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 LRRC63Q05C16 580 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 TMEM119Q4V9L6 283 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 MOXD1Q6UVY6 613 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 RSRC2Q7L4I2 434 aaKnown RBP22.47■■□□□ 1.19
PMPCB-202ENST00000428154 CREBRFQ8IUR6 639 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 RAD54LQ92698 747 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 LZTFL1Q9NQ48 299 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 BLOC1S4Q9NUP1 217 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 ZNHIT6Q9NWK9 470 aaKnown RBP22.47■■□□□ 1.19
PMPCB-202ENST00000428154 PI4KBQ9UBF8 816 aa22.47■■□□□ 1.19
PMPCB-202ENST00000428154 TTC26A0AVF1 554 aa22.46■■□□□ 1.19
PMPCB-202ENST00000428154 USP11P51784 963 aa22.46■■□□□ 1.19
PMPCB-202ENST00000428154 FAM193AP78312 1265 aa22.46■■□□□ 1.19
PMPCB-202ENST00000428154 CDK17Q00537 523 aa22.46■■□□□ 1.19
PMPCB-202ENST00000428154 GABPB1Q06547 395 aaPredicted RBP22.46■■□□□ 1.19
PMPCB-202ENST00000428154 STK4Q13043 487 aa22.46■■□□□ 1.19
PMPCB-202ENST00000428154 MEA1Q16626 185 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms