RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CAPN2P17655 700 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 SAT1P21673 171 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 ADAM9Q13443 819 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 ZSWIM5Q9P217 1185 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 OVOS2A0A0G2JMS6 1433 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 CCNA1P78396 465 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 FAM160B1Q5W0V3 765 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 CCDC89Q8N998 374 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 PI4K2BQ8TCG2 481 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 AFG3L2Q9Y4W6 797 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 CPSF1Q10570 1443 aaKnown RBP10.71□□□□□ -0.7
SNX13-203ENST00000428135 RPN1P04843 607 aaKnown RBP10.71□□□□□ -0.7
SNX13-203ENST00000428135 EPHA10Q5JZY3 1008 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 SLC44A5Q8NCS7 719 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 DDX23Q9BUQ8 820 aaKnown RBP10.71□□□□□ -0.7
SNX13-203ENST00000428135 TMEM63CQ9P1W3 806 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 STIM2Q9P246 746 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 LRFN2Q9ULH4 789 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 STK24Q9Y6E0 443 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 SYNMO15061 1565 aa10.71□□□□□ -0.7
SNX13-203ENST00000428135 BLMP54132 1417 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 CIAO1O76071 339 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 TBC1D8O95759 1140 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 SYDE2Q5VT97 1194 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 ANKRD13CQ8N6S4 541 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 IFIH1Q9BYX4 1025 aaKnown RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 SFI1A8K8P3 1242 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 IREB2P48200 963 aaKnown RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 CDK8P49336 464 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 TSTA3Q13630 321 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 NAA35Q5VZE5 725 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 KIAA1524Q8TCG1 905 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 MGARPQ8TDB4 240 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 CEP170P1Q96L14 293 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 SMC6Q96SB8 1091 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 GPBP1L1Q9HC44 474 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 C1orf112Q9NSG2 853 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 NMT2O60551 498 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 APOA5Q6Q788 366 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 KRT222Q8N1A0 295 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 C7orf31Q8N865 590 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 UHMK1Q8TAS1 419 aaKnown RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 TBC1D31Q96DN5 1066 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 LMBRD1Q9NUN5 540 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 MYL3P08590 195 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 MCAMP43121 646 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 CRKP46108 304 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 NME8Q8N427 588 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 GPR161Q8N6U8 529 aaKnown RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 STMN4Q9H169 189 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 ARMCX3Q9UH62 379 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 FNDC3AQ9Y2H6 1198 aaKnown RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 ZHX2Q9Y6X8 837 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 OATP04181 439 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 STAT1P42224 750 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 LACTBP83111 547 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 NLRP4Q96MN2 994 aa10.7□□□□□ -0.7
SNX13-203ENST00000428135 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
SNX13-203ENST00000428135 CCDC110Q8TBZ0 833 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 GJB4Q9NTQ9 266 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 MTMR6Q9Y217 621 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 SPHKAPQ2M3C7 1700 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 TRIM14Q14142 442 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 ADALQ6DHV7 355 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 RAVER2Q9HCJ3 691 aaKnown RBP10.69□□□□□ -0.7
SNX13-203ENST00000428135 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 LRRN2O75325 713 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 STAM2O75886 525 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 C2orf69Q8N8R5 385 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 GSDMBQ8TAX9 411 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 NUP58Q9BVL2 599 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 FANCLQ9NW38 375 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
SNX13-203ENST00000428135 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 DYNC1I1O14576 645 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
SNX13-203ENST00000428135 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
SNX13-203ENST00000428135 CTTNQ14247 550 aaKnown RBP10.69□□□□□ -0.7
SNX13-203ENST00000428135 RPS6KA1Q15418 735 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 CDC37Q16543 378 aaPredicted RBP10.69□□□□□ -0.7
SNX13-203ENST00000428135 FAM83BQ5T0W9 1011 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 FBXO41Q8TF61 875 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 VPS37BQ9H9H4 285 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 DPEP1P16444 411 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 SCARA5Q6ZMJ2 495 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms