RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
PDE6D-203ENST00000428104 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
PDE6D-203ENST00000428104 FAM50BQ9Y247 325 aa17.25■□□□□ 0.35
PDE6D-203ENST00000428104 DMDP11532 3685 aa17.24■□□□□ 0.35
PDE6D-203ENST00000428104 MYH8P13535 1937 aa17.24■□□□□ 0.35
PDE6D-203ENST00000428104 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
PDE6D-203ENST00000428104 TTF1Q15361 905 aaPredicted RBP17.24■□□□□ 0.35
PDE6D-203ENST00000428104 DUSP28Q4G0W2 176 aa17.24■□□□□ 0.35
PDE6D-203ENST00000428104 HERC4Q5GLZ8 1057 aaPredicted RBP17.24■□□□□ 0.35
PDE6D-203ENST00000428104 GPHNQ9NQX3 736 aaPredicted RBP17.24■□□□□ 0.35
PDE6D-203ENST00000428104 NYAP2Q9P242 653 aa17.24■□□□□ 0.35
PDE6D-203ENST00000428104 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
PDE6D-203ENST00000428104 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
PDE6D-203ENST00000428104 TANC1Q9C0D5 1861 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 GOLIM4O00461 696 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
PDE6D-203ENST00000428104 TRIM27P14373 513 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 CPT1AP50416 773 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 NFRKBQ6P4R8 1299 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 AACSQ86V21 672 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
PDE6D-203ENST00000428104 PURBQ96QR8 312 aaKnown RBP17.23■□□□□ 0.35
PDE6D-203ENST00000428104 VTA1Q9NP79 307 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
PDE6D-203ENST00000428104 DCHS1Q96JQ0 3298 aa17.23■□□□□ 0.35
PDE6D-203ENST00000428104 LRRFIP1Q32MZ4 808 aaKnown RBP17.22■□□□□ 0.35
PDE6D-203ENST00000428104 TIGD5Q53EQ6 642 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 TCEAL5Q5H9L2 206 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 CNKSR3Q6P9H4 555 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 RNF135Q8IUD6 432 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
PDE6D-203ENST00000428104 BANK1Q8NDB2 785 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 DNAJC2Q99543 621 aaKnown RBP17.22■□□□□ 0.35
PDE6D-203ENST00000428104 WDR11Q9BZH6 1224 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 C1orf115Q9H7X2 142 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 TECTAO75443 2155 aa17.22■□□□□ 0.35
PDE6D-203ENST00000428104 RASA1P20936 1047 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 PTPROQ16827 1216 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 CTR9Q6PD62 1173 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 BMP8AQ7Z5Y6 402 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 STK11IPQ8N1F8 1099 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 AFAP1L1Q8TED9 768 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 EDAQ92838 391 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 PBXIP1Q96AQ6 731 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 TRERF1Q96PN7 1200 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 CLDND1Q9NY35 253 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
PDE6D-203ENST00000428104 TMEM221A6NGB7 291 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 M0R296 226 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 ANP32CO43423 234 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 ALAS1P13196 640 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 CLUL1Q15846 466 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 PTGISQ16647 500 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 PRRX2Q99811 253 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 CYP39A1Q9NYL5 469 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 CACNA1HO95180 2353 aa17.2■□□□□ 0.34
PDE6D-203ENST00000428104 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 ABHD14A-ACY1A0A1B0GW23 586 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 NBNO60934 754 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 CHGBP05060 677 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 SELPP16109 830 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 SMAD2Q15796 467 aaKnown RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 LRRC8DQ7L1W4 858 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 MORC4Q8TE76 937 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 ALG13Q9NP73 1137 aaKnown RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
PDE6D-203ENST00000428104 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
PDE6D-203ENST00000428104 TMEM232C9JQI7 657 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 CXCL10P02778 98 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 LTBRP36941 435 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 EPC2Q52LR7 807 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 NSMFQ6X4W1 530 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 TRIM67Q6ZTA4 783 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 DHX38Q92620 1227 aaKnown RBP17.18■□□□□ 0.34
PDE6D-203ENST00000428104 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 POP1Q99575 1024 aaKnown RBP17.18■□□□□ 0.34
PDE6D-203ENST00000428104 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 SIP14410 1827 aa17.18■□□□□ 0.34
PDE6D-203ENST00000428104 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
PDE6D-203ENST00000428104 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 VPS13AQ96RL7 3174 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 BMP3P12645 472 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 PTPRZ1P23471 2315 aaPredicted RBP17.17■□□□□ 0.34
PDE6D-203ENST00000428104 ADD2P35612 726 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 SNAP25P60880 206 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms